G180458


Basic Information

Item Value
gene id G180458
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 71990078 ~ 71990556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU204871
GTCAGTATTCAGTGGTGAAGGACATCACAGGGAGCCAATGGAAGGCTTTATTGATCATTTCTTTCACTCTGGGTAATAATAGTTGCATGACAGATTGCatttaacattttagtcattttgcagattttaccattatttaactaggcaagtcagttatgaacaaattcttatttacaatgacagcctaggaacagtgggttaactgccttgttcaggggcagaacaatatatttttaccttgtcagctctgggattcaatctagcaacctttcggttactggccctacgctctaaccactagggtacctgccaccCTGTTGTATCTAATTTGTCCTGAAACATTGACGGTTGAAATGCAATGAGCTTGACATCTTGATATCTCAACACAAAAAATACAGTGGGCCTTTATATTTTTGGTAGTGTGTGTCTATCTACTATGTCAGTACAGTAAATCATTCTACAAAACTGCAGTCTGTCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204871 True 479 lncRNA 0.37 1 71990078 71990556

Neighbor

gene id symbol gene type direction distance location
LOC118937292 NA coding upstream 7257 71961719 ~ 71982821 (+)
LOC118941481 NA coding upstream 29979 71944685 ~ 71960099 (+)
LOC110495533 lysmd4 coding upstream 217832 71766251 ~ 71772246 (+)
LOC110495511 arrdc4 coding upstream 276348 71705084 ~ 71713730 (+)
LOC110495497 NA coding upstream 547315 71432338 ~ 71442763 (+)
LOC110495562 LOC106561144 coding downstream 5138 71995694 ~ 72008263 (+)
LOC110495604 LOC106573778 coding downstream 69300 72059717 ~ 72065199 (+)
LOC110533853 LOC106561194 coding downstream 260328 72250884 ~ 72253809 (+)
LOC110495632 LOC106561195 coding downstream 346246 72336802 ~ 72343356 (+)
tln2b LOC106561152 coding downstream 897761 72888317 ~ 73030225 (+)
G180456 NA non-coding upstream 1438 71988309 ~ 71988640 (+)
G180454 NA non-coding upstream 3087 71986771 ~ 71986991 (+)
G180449 NA non-coding upstream 11248 71978628 ~ 71978830 (+)
G180438 NA non-coding upstream 28877 71960982 ~ 71961201 (+)
G180468 LOC106561145 non-coding downstream 27547 72018103 ~ 72018501 (+)
G180483 NA non-coding downstream 52830 72043386 ~ 72046632 (+)
G180481 NA non-coding downstream 61748 72052304 ~ 72052540 (+)
G180501 NA non-coding downstream 85377 72075933 ~ 72076159 (+)
G180502 LOC100380853 non-coding downstream 88518 72079074 ~ 72079455 (+)
igf1ra igf1r other upstream 1182174 70794530 ~ 70905277 (+)
G177812 NA other upstream 1876638 70107286 ~ 70113440 (+)
G177067 NA other upstream 2532645 69456558 ~ 69457433 (+)
G176725 lonp2 other upstream 3032192 68956263 ~ 68957886 (+)
G176612 LOC100846954 other upstream 3128710 68860838 ~ 68861368 (+)
G181995 NA other downstream 1350824 73341380 ~ 73342277 (+)
LOC110501876 LOC106561170 other downstream 1586209 73456669 ~ 73580075 (+)
G182139 LOC106561173 other downstream 1616336 73606892 ~ 73610237 (+)

Expression


Co-expression Network