G180481


Basic Information

Item Value
gene id G180481
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 72052304 ~ 72052540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU204903
gttgaaaactaaatgttagtctaaaagaaatgtgagataatatctagatgctttttatagtggcgatcaagtttataaattgcctggctgagcTGAAGACACAGCGGATTGGCAGAcaaatggaacagagtaaataggcattttaacatcatagatttagccagaGTTAATGTGGTTTACCCAATCAGCAtcagacccacccgttgtatgaATAGGCttaaaggccgagacaataag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204903 True 237 lncRNA 0.38 1 72052304 72052540

Neighbor

gene id symbol gene type direction distance location
LOC110495562 LOC106561144 coding upstream 44041 71995694 ~ 72008263 (+)
LOC118937292 NA coding upstream 69483 71961719 ~ 71982821 (+)
LOC118941481 NA coding upstream 92205 71944685 ~ 71960099 (+)
LOC110495533 lysmd4 coding upstream 280058 71766251 ~ 71772246 (+)
LOC110495511 arrdc4 coding upstream 338574 71705084 ~ 71713730 (+)
LOC110495604 LOC106573778 coding downstream 7316 72059717 ~ 72065199 (+)
LOC110533853 LOC106561194 coding downstream 198344 72250884 ~ 72253809 (+)
LOC110495632 LOC106561195 coding downstream 284262 72336802 ~ 72343356 (+)
tln2b LOC106561152 coding downstream 835777 72888317 ~ 73030225 (+)
LOC110495666 LOC106573503 coding downstream 1003588 73056128 ~ 73069598 (+)
G180483 NA non-coding upstream 5672 72043386 ~ 72046632 (+)
G180468 LOC106561145 non-coding upstream 33803 72018103 ~ 72018501 (+)
G180458 NA non-coding upstream 61748 71990078 ~ 71990556 (+)
G180456 NA non-coding upstream 63664 71988309 ~ 71988640 (+)
G180454 NA non-coding upstream 65313 71986771 ~ 71986991 (+)
G180501 NA non-coding downstream 23393 72075933 ~ 72076159 (+)
G180502 LOC100380853 non-coding downstream 26534 72079074 ~ 72079455 (+)
G180809 NA non-coding downstream 197103 72249643 ~ 72249876 (+)
G180844 NA non-coding downstream 218453 72270993 ~ 72271320 (+)
G180855 NA non-coding downstream 226663 72279203 ~ 72279529 (+)
igf1ra igf1r other upstream 1244400 70794530 ~ 70905277 (+)
G177812 NA other upstream 1938864 70107286 ~ 70113440 (+)
G177067 NA other upstream 2594871 69456558 ~ 69457433 (+)
G176725 lonp2 other upstream 3094418 68956263 ~ 68957886 (+)
G176612 LOC100846954 other upstream 3190936 68860838 ~ 68861368 (+)
G181995 NA other downstream 1288840 73341380 ~ 73342277 (+)
LOC110501876 LOC106561170 other downstream 1524225 73456669 ~ 73580075 (+)
G182139 LOC106561173 other downstream 1554352 73606892 ~ 73610237 (+)

Expression


Co-expression Network