G180855


Basic Information

Item Value
gene id G180855
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 72279203 ~ 72279529 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU205327
tgggtcaaggtttggctttttcaagaaaggctttattactgccacttttagtgagtttggtacacatccggtggatagagagccgtttattatgttcaacataggaggaccaagcacaggaagcagctctttcagtagtttagttggaatagggtccagtatgcagcttgaaggtttagaggccaggattattttcatcattgtgtcaagagatatagtactaaaacacttgagcgtctctcttgatcctaggtcctggcagagttgtgcagactcaggacaactgagctttgaaggaatacgcagatttaaagaggagtccgtaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205327 True 327 lncRNA 0.33 1 72279203 72279529

Neighbor

gene id symbol gene type direction distance location
LOC110533853 LOC106561194 coding upstream 25394 72250884 ~ 72253809 (+)
LOC110495604 LOC106573778 coding upstream 214004 72059717 ~ 72065199 (+)
LOC110495562 LOC106561144 coding upstream 270940 71995694 ~ 72008263 (+)
LOC118937292 NA coding upstream 296382 71961719 ~ 71982821 (+)
LOC118941481 NA coding upstream 319104 71944685 ~ 71960099 (+)
LOC110495632 LOC106561195 coding downstream 57273 72336802 ~ 72343356 (+)
tln2b LOC106561152 coding downstream 608788 72888317 ~ 73030225 (+)
LOC110495666 LOC106573503 coding downstream 776599 73056128 ~ 73069598 (+)
lactb LOC106561153 coding downstream 792888 73072417 ~ 73075269 (+)
tmem266 LOC106561154 coding downstream 804760 73084289 ~ 73146123 (+)
G180844 NA non-coding upstream 7883 72270993 ~ 72271320 (+)
G180809 NA non-coding upstream 29327 72249643 ~ 72249876 (+)
G180502 LOC100380853 non-coding upstream 199748 72079074 ~ 72079455 (+)
G180501 NA non-coding upstream 203044 72075933 ~ 72076159 (+)
G180481 NA non-coding upstream 226663 72052304 ~ 72052540 (+)
G180865 NA non-coding downstream 8487 72288016 ~ 72288241 (+)
G180893 NA non-coding downstream 33807 72313336 ~ 72313614 (+)
G180895 NA non-coding downstream 36148 72315677 ~ 72315985 (+)
G180901 NA non-coding downstream 42397 72321926 ~ 72322148 (+)
G180902 NA non-coding downstream 43014 72322543 ~ 72322781 (+)
igf1ra igf1r other upstream 1471299 70794530 ~ 70905277 (+)
G177812 NA other upstream 2165763 70107286 ~ 70113440 (+)
G177067 NA other upstream 2821770 69456558 ~ 69457433 (+)
G181995 NA other downstream 1061851 73341380 ~ 73342277 (+)
LOC110501876 LOC106561170 other downstream 1297236 73456669 ~ 73580075 (+)
G182139 LOC106561173 other downstream 1327363 73606892 ~ 73610237 (+)
G182144 NA other downstream 1343007 73622536 ~ 73624518 (+)
G183361 NA other downstream 2250120 74529649 ~ 74535026 (+)

Expression


Co-expression Network