G180989


Basic Information

Item Value
gene id G180989
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 72380677 ~ 72380890 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU205472
CCGCATATTGGATTGTGAAATGATTGCAAATTTTTGCTAGTGGATTGCAACCTTAAGATAGTGTGAGAAATGTGGTCCATGAGGCAAGCTATGCTGATACAACTGAGGAATACGCTGGGTCTGGTGTTTTCAAAGTGTGCATGGATCTTCAACCAATTTAGTTACATGTAAGTCACTGGGCTGGCTCTGATTGGCATATGTCCACATTATTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205472 True 214 lncRNA 0.41 1 72380677 72380890

Neighbor

gene id symbol gene type direction distance location
LOC110495632 LOC106561195 coding upstream 37321 72336802 ~ 72343356 (+)
LOC110533853 LOC106561194 coding upstream 126868 72250884 ~ 72253809 (+)
LOC110495604 LOC106573778 coding upstream 315478 72059717 ~ 72065199 (+)
LOC110495562 LOC106561144 coding upstream 372414 71995694 ~ 72008263 (+)
LOC118937292 NA coding upstream 397856 71961719 ~ 71982821 (+)
tln2b LOC106561152 coding downstream 507427 72888317 ~ 73030225 (+)
LOC110495666 LOC106573503 coding downstream 675238 73056128 ~ 73069598 (+)
lactb LOC106561153 coding downstream 691527 73072417 ~ 73075269 (+)
tmem266 LOC106561154 coding downstream 703399 73084289 ~ 73146123 (+)
isl2a LOC106561155 coding downstream 782869 73163759 ~ 73169203 (+)
G180986 NA non-coding upstream 1333 72379138 ~ 72379344 (+)
G180945 NA non-coding upstream 29371 72349845 ~ 72351306 (+)
G180943 NA non-coding upstream 32002 72348311 ~ 72348675 (+)
G180903 NA non-coding upstream 57167 72323230 ~ 72323510 (+)
G180902 NA non-coding upstream 57896 72322543 ~ 72322781 (+)
G181024 NA non-coding downstream 26061 72406951 ~ 72407308 (+)
G181013 NA non-coding downstream 52967 72433857 ~ 72441882 (+)
G181040 NA non-coding downstream 75990 72456880 ~ 72463212 (+)
G181600 NA non-coding downstream 425481 72806371 ~ 72806700 (+)
G181601 NA non-coding downstream 426010 72806900 ~ 72807175 (+)
igf1ra igf1r other upstream 1572773 70794530 ~ 70905277 (+)
G177812 NA other upstream 2267237 70107286 ~ 70113440 (+)
G177067 NA other upstream 2923244 69456558 ~ 69457433 (+)
G181995 NA other downstream 960490 73341380 ~ 73342277 (+)
LOC110501876 LOC106561170 other downstream 1195875 73456669 ~ 73580075 (+)
G182139 LOC106561173 other downstream 1226002 73606892 ~ 73610237 (+)
G182144 NA other downstream 1241646 73622536 ~ 73624518 (+)
G183361 NA other downstream 2148759 74529649 ~ 74535026 (+)

Expression


Co-expression Network