G181013


Basic Information

Item Value
gene id G181013
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 72433857 ~ 72441882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU205496
attgtatgacaagtgacagtttaattatgagtaaagatatctggtacaacgtatacgggccatttcattcggttcttaaggaaccagcagaaaaagaagcgcagataacagagtgcacatgtctcatatacagaacagaaagtaggttgattctagaagatcgggtcttcgggttggttcaggctgaggtgtagtcttcttggattggccctgttgggccgtccgtcatccctctgagtcttgttctttgccacacaatgttcagctaaaaaggagattaggtgtgtgcgctgtcctcagtcacacaatgttcggctagaaaggagattaggtgtgtgcgctggtttctgcaagtcaaggctgtctcttcctcccaatgtgtgggtgtatgtcttatctgtgtgtcctcggcagttagtgtgtgtaatgtgtgtgtgctgtgtgtgtgggtgtgggagctatcctgtatgggacctaacatgttttactgtgaaaatacgctgtctcagttatagcaatgtaatagcagtaggctggtcacctgcataagaaatagc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU205496 True 557 lncRNA 0.38 2 72433857 72441882

Neighbor

gene id symbol gene type direction distance location
LOC110495632 LOC106561195 coding upstream 90501 72336802 ~ 72343356 (+)
LOC110533853 LOC106561194 coding upstream 180048 72250884 ~ 72253809 (+)
LOC110495604 LOC106573778 coding upstream 368658 72059717 ~ 72065199 (+)
LOC110495562 LOC106561144 coding upstream 425594 71995694 ~ 72008263 (+)
LOC118937292 NA coding upstream 451036 71961719 ~ 71982821 (+)
tln2b LOC106561152 coding downstream 446435 72888317 ~ 73030225 (+)
LOC110495666 LOC106573503 coding downstream 614246 73056128 ~ 73069598 (+)
lactb LOC106561153 coding downstream 630535 73072417 ~ 73075269 (+)
tmem266 LOC106561154 coding downstream 642407 73084289 ~ 73146123 (+)
isl2a LOC106561155 coding downstream 721877 73163759 ~ 73169203 (+)
G181024 NA non-coding upstream 26549 72406951 ~ 72407308 (+)
G180989 NA non-coding upstream 52967 72380677 ~ 72380890 (+)
G180986 NA non-coding upstream 54513 72379138 ~ 72379344 (+)
G180945 NA non-coding upstream 82551 72349845 ~ 72351306 (+)
G180943 NA non-coding upstream 85182 72348311 ~ 72348675 (+)
G181040 NA non-coding downstream 14998 72456880 ~ 72463212 (+)
G181600 NA non-coding downstream 364489 72806371 ~ 72806700 (+)
G181601 NA non-coding downstream 365018 72806900 ~ 72807175 (+)
G181706 NA non-coding downstream 445391 72887273 ~ 72935432 (+)
G181833 NA non-coding downstream 652071 73093953 ~ 73095214 (+)
igf1ra igf1r other upstream 1625953 70794530 ~ 70905277 (+)
G177812 NA other upstream 2320417 70107286 ~ 70113440 (+)
G177067 NA other upstream 2976424 69456558 ~ 69457433 (+)
G181995 NA other downstream 899498 73341380 ~ 73342277 (+)
LOC110501876 LOC106561170 other downstream 1134883 73456669 ~ 73580075 (+)
G182139 LOC106561173 other downstream 1165010 73606892 ~ 73610237 (+)
G182144 NA other downstream 1180654 73622536 ~ 73624518 (+)
G183361 NA other downstream 2087767 74529649 ~ 74535026 (+)

Expression


Co-expression Network