Gene
RNA
| Item | Value |
|---|---|
| gene id | G181520 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 72752264 ~ 72752489 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110487741, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU206023 | True | 226 | lncRNA | 0.46 | 1 | 72752264 | 72752489 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| roraa | LOC106561150 | coding | downstream | 7752 | 72456866 ~ 72744512 (-) |
| LOC118941485 | NA | coding | downstream | 442293 | 72300332 ~ 72309971 (-) |
| LOC110495618 | LOC106561149 | coding | downstream | 576817 | 72106006 ~ 72175447 (-) |
| LOC100135856 | LOC100135856 | coding | downstream | 661481 | 72070481 ~ 72090783 (-) |
| LOC110495580 | LOC106561145 | coding | downstream | 702079 | 72012258 ~ 72050185 (-) |
| LOC118937294 | NA | coding | upstream | 21575 | 72774064 ~ 72775649 (-) |
| c2cd4a | LOC106561196 | coding | upstream | 119482 | 72833292 ~ 72877678 (-) |
| LOC110495704 | nrg4 | coding | upstream | 323531 | 73076020 ~ 73078379 (-) |
| etfa | LOC100194695 | coding | upstream | 393732 | 73146221 ~ 73157311 (-) |
| scaper | LOC106561156 | coding | upstream | 424232 | 73176721 ~ 73292819 (-) |
| G181515 | NA | non-coding | downstream | 2399 | 72749634 ~ 72749865 (-) |
| G181257 | NA | non-coding | downstream | 303728 | 72423136 ~ 72448536 (-) |
| G181251 | NA | non-coding | downstream | 339078 | 72412929 ~ 72413186 (-) |
| G181247 | NA | non-coding | downstream | 343331 | 72408733 ~ 72408933 (-) |
| G181246 | NA | non-coding | downstream | 344146 | 72407666 ~ 72408118 (-) |
| G181529 | NA | non-coding | upstream | 4959 | 72757448 ~ 72757706 (-) |
| G181544 | NA | non-coding | upstream | 10981 | 72763470 ~ 72763677 (-) |
| G181545 | NA | non-coding | upstream | 11704 | 72764193 ~ 72764403 (-) |
| G182443 | NA | non-coding | upstream | 173236 | 72925725 ~ 72928284 (-) |
| G180716 | NA | other | downstream | 640601 | 72110968 ~ 72111663 (-) |
| G179754 | NA | other | downstream | 1277285 | 71474372 ~ 71474979 (-) |
| LOC110495479 | mctp2 | other | downstream | 1610080 | 71134265 ~ 71164057 (-) |
| G179310 | mef2a | other | downstream | 1682060 | 70998045 ~ 71070204 (-) |
| ttc23 | ttc23 | other | downstream | 1807503 | 70926632 ~ 70945359 (-) |
| G182494 | NA | other | upstream | 274895 | 73011478 ~ 73066724 (-) |
| G182708 | NA | other | upstream | 592461 | 73344950 ~ 73345847 (-) |
| G182882 | NA | other | upstream | 923723 | 73676212 ~ 73676423 (-) |
