G181601


Basic Information

Item Value
gene id G181601
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 72806900 ~ 72807175 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU206104
atgggcctgtaagtaagcatttatcTGTTGTactcggcacatgtgacaaataaaatgtgatttctctggagagacctgaaaatagctgttcagtgatgctccccatccaacctgacagagcttgagaggatctgcagagaagaatggggaaagctccccaaataaaggtgtgccaagcttgtagcatcatacccaagaagactcaaggctgtaattgctgccaaaggtgcttcaacagtactgagtactgagtaaagggtctgaatacttatgtaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206104 True 276 lncRNA 0.41 1 72806900 72807175

Neighbor

gene id symbol gene type direction distance location
LOC110495632 LOC106561195 coding upstream 463544 72336802 ~ 72343356 (+)
LOC110533853 LOC106561194 coding upstream 553091 72250884 ~ 72253809 (+)
LOC110495604 LOC106573778 coding upstream 741701 72059717 ~ 72065199 (+)
LOC110495562 LOC106561144 coding upstream 798637 71995694 ~ 72008263 (+)
LOC118937292 NA coding upstream 824079 71961719 ~ 71982821 (+)
tln2b LOC106561152 coding downstream 81142 72888317 ~ 73030225 (+)
LOC110495666 LOC106573503 coding downstream 248953 73056128 ~ 73069598 (+)
lactb LOC106561153 coding downstream 265242 73072417 ~ 73075269 (+)
tmem266 LOC106561154 coding downstream 277114 73084289 ~ 73146123 (+)
isl2a LOC106561155 coding downstream 356584 73163759 ~ 73169203 (+)
G181600 NA non-coding upstream 200 72806371 ~ 72806700 (+)
G181040 NA non-coding upstream 343688 72456880 ~ 72463212 (+)
G181013 NA non-coding upstream 365018 72433857 ~ 72441882 (+)
G181024 NA non-coding upstream 399592 72406951 ~ 72407308 (+)
G180989 NA non-coding upstream 426010 72380677 ~ 72380890 (+)
G181706 NA non-coding downstream 80098 72887273 ~ 72935432 (+)
G181833 NA non-coding downstream 286778 73093953 ~ 73095214 (+)
G181841 NA non-coding downstream 304326 73111501 ~ 73157853 (+)
G181854 NA non-coding downstream 324984 73132159 ~ 73132598 (+)
G181859 NA non-coding downstream 329612 73136787 ~ 73407337 (+)
igf1ra igf1r other upstream 1998996 70794530 ~ 70905277 (+)
G177812 NA other upstream 2693460 70107286 ~ 70113440 (+)
G177067 NA other upstream 3349467 69456558 ~ 69457433 (+)
G181995 NA other downstream 534205 73341380 ~ 73342277 (+)
LOC110501876 LOC106561170 other downstream 769590 73456669 ~ 73580075 (+)
G182139 LOC106561173 other downstream 799717 73606892 ~ 73610237 (+)
G182144 NA other downstream 815361 73622536 ~ 73624518 (+)
G183361 NA other downstream 1722474 74529649 ~ 74535026 (+)

Expression


Co-expression Network