G181833


Basic Information

Item Value
gene id G181833
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73093953 ~ 73095214 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU206350
aaataaaacaatttaaagacaatgctccCAAATattaactgagtgtatgtaaaattccccactggaaatgtgatgaaagaaataaaagctgaagtaaatcattctctctactattattctggcatttcacattcttaaaatagtggtgatcctaactgacctaagacagggaatttttactaagattaaatgtcaagaattgtgaaaactgagtttaaatgtatttggctaaggtgtatgtaaactttcgacttcaactgtatatagaggACAAGAAATTGAGAGTACTATTTTTTCCCCTAATAGTTTACAATTCTTAATCTTGTCTTTGGTATGCTGTCTTGTAATATACttgcagtgtacaaaacattaggaacaccttcctaatattgagttgcacccccttttgccctcagaacaggctcaatggcccatgttgactccaatgcttcccacagttgtgtcgaattggctggttgtccttttggtggtggatcatacttgatacacatgggaaactgttgagtgtgaaaaacccagtagaattgcacttcttgacacactcaaactggtgcgcctggcacctactaccataccccaattcaaaggcacttatatcttttgtcttacccatttaccctctaaatggcacacatgcagtacacaatcaatgtctcaattgtctcaaggcttaaaaatcattatttaacctgtctcctcccttttatctacactgattgaagtggatttaacaggtgacatcaataagggatcatagctttcacctggattcacctggtcagtcgaatgttttgtacactcattgtatgTCCTTTTACATATTTTATCAACATTATCAGGCCAGTCCTTTCATGGTTATACTGTAAGTCAGCATAGTATATAAAGCCTTTCATGGTTATACTGTAAGTCAGCATAGTATATAAAGCCTTTCATGGTTATACtgtaagtcagtatagtatatgaggcctttcatggttatactgtaagtcagtatagtatataaagcctttcatggttatactgtaagtcagtatagtatatGAGGCCTTTCATGGTTATACTGTAAGTCAGCATAGTATATAAAGCCTTTCATGGTTATACtgtaagtcagtatagtatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206350 True 1142 lncRNA 0.36 2 73093953 73095214

Neighbor

gene id symbol gene type direction distance location
lactb LOC106561153 coding upstream 18684 73072417 ~ 73075269 (+)
LOC110495666 LOC106573503 coding upstream 24355 73056128 ~ 73069598 (+)
tln2b LOC106561152 coding upstream 63728 72888317 ~ 73030225 (+)
LOC110495632 LOC106561195 coding upstream 750597 72336802 ~ 72343356 (+)
LOC110533853 LOC106561194 coding upstream 840144 72250884 ~ 72253809 (+)
isl2a LOC106561155 coding downstream 68545 73163759 ~ 73169203 (+)
LOC110495782 LOC106561158 coding downstream 204366 73299580 ~ 73316950 (+)
si:dkey-24l11.2 LOC106561161 coding downstream 256586 73351800 ~ 73361169 (+)
LOC110495809 LOC106561197 coding downstream 266095 73361309 ~ 73362530 (+)
LOC110495840 LOC106561167 coding downstream 305045 73400259 ~ 73405787 (+)
G181706 NA non-coding upstream 158521 72887273 ~ 72935432 (+)
G181601 NA non-coding upstream 286778 72806900 ~ 72807175 (+)
G181600 NA non-coding upstream 287253 72806371 ~ 72806700 (+)
G181040 NA non-coding upstream 630741 72456880 ~ 72463212 (+)
G181013 NA non-coding upstream 652071 72433857 ~ 72441882 (+)
G181841 NA non-coding downstream 16287 73111501 ~ 73157853 (+)
G181854 NA non-coding downstream 36945 73132159 ~ 73132598 (+)
G181859 NA non-coding downstream 41573 73136787 ~ 73407337 (+)
G181887 NA non-coding downstream 98133 73193347 ~ 73194365 (+)
G181930 LOC106561156 non-coding downstream 149681 73244895 ~ 73273032 (+)
LOC110495604 LOC106573778 other upstream 1028758 72059717 ~ 72065199 (+)
igf1ra igf1r other upstream 2286049 70794530 ~ 70905277 (+)
G177812 NA other upstream 2980513 70107286 ~ 70113440 (+)
G177067 NA other upstream 3636520 69456558 ~ 69457433 (+)
G181995 NA other downstream 246166 73341380 ~ 73342277 (+)
LOC110501876 LOC106561170 other downstream 481551 73456669 ~ 73580075 (+)
G182139 LOC106561173 other downstream 511678 73606892 ~ 73610237 (+)
G182144 NA other downstream 527322 73622536 ~ 73624518 (+)
G183361 NA other downstream 1434435 74529649 ~ 74535026 (+)

Expression


Co-expression Network