G182734 (LOC106561167)


Basic Information

Item Value
gene id G182734
gene name LOC106561167
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73408766 ~ 73410961 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU207334
TATTATCCATCCCCGGAaattgttgaagcatctttgagCTGGTATGAAACATTTGGTTATGCTATCTCCATGGTATGTCTTCACAAGGTCATAGGCTTTGGAGACAACTGCCAAACTGGTGAGGACCACAAGGGCAATGGCCCTCTCAAAGTCTACTATGCATGCTGTGATGAAGTATGCCACATAGCctgCTCCAAGCAAGCCCAGTACAATGTATTTGATGGTTTTGGCGTGAGCTCTAAAGTAATCCTCTGTGGCATTAATAGGCTTGGAAACCTTACTTAAATATAATCCCAATCCTTTTCTTGAGTGCTCCTCTTTGAAACTGCTTCTGTTACTAACTGAAATGCTATCCCCCTGTGTTTCAAATCCCTCATTGACCACCCCATTAACATGAGACAGAACTTTGAGCGCTGTACCAGTGGCTTCTGCTGTAAAAGAGAGGCAAAGTTTAGTCATTTGTATCAGCTGTTTGAAAAACAATGTTCACCACACTCAATGGAGCCAAAAACGTCAcatcttaaatctgtatttcctCTGTGAAACACGTTGAGATTCTAGCACCCAGGGAAGGCGAAAGCATTCAAACACTATCCTCATCGTCATCTTGTGGAAAAAAGTcctcaaaacacacacaatcTGTTCAAAACATCCTTAAACGTTCAATTCAGGACAACAGGAATGCCAATAACTTACTCATTGTGAGTGTTCTTAGTCTGTGTGACGAATGCTATGTTGCAAAATACTGTGTCGGGACATATACACTGCCCTCCTTGAGAAATCTTGTCATAAATTAACAGACAAGTTCAAGAGGAGCTTTAATCAGTTTCTCAGGCAGTCCTTGACGTAGGCATGCACGTGGCAAGTGTTGGGATTGATTTATTGATAGAccatttaaaataaatattagATTAGAGGCATTCTGTTTACTTTGGAAACCAAATAATTCACTTTGTCCAttcagcaaaaataaataacagataTGATTTTAGACTTAGGCCTAACCATGTAATAACATCCAATATGCAATGGTTGATTAGACATAGCTGACTTTGTTAGGGTTATATTCTTACTAAAGAGTCAATACAGTATAGTGGATTATCCTAGAAGGTCTATCTGGTAAACACTCCACCCTATCCTCTATATTATTATGTCGTAAGTAGAAAAACAGAAGACCTAGCCCTTTTTTCTCCAGTACAACCATAACATACATTTTACATGTCTCATAAAAGTGC

Function

NR:

description
sodium/nucleoside cotransporter 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207334 True 1235 lncRNA 0.48 4 73408766 73410961

Neighbor

gene id symbol gene type direction distance location
znf592 znf592 coding downstream 23169 73378175 ~ 73385597 (-)
kti12 kti12 coding downstream 35088 73365566 ~ 73373678 (-)
LOC100653450 LOC106561160 coding downstream 79888 73324175 ~ 73328878 (-)
scaper LOC106561156 coding downstream 115947 73176721 ~ 73292819 (-)
etfa LOC100194695 coding downstream 251455 73146221 ~ 73157311 (-)
alpk3a LOC106561166 coding upstream 7654 73418615 ~ 73440795 (-)
blm blm coding upstream 168935 73579896 ~ 73605873 (-)
ctsh LOC106561173 coding upstream 195928 73606889 ~ 73610117 (-)
rasgrf1 LOC106561174 coding upstream 199313 73610274 ~ 73646136 (-)
si:ch211-107o10.3 LOC106561176 coding upstream 328221 73739182 ~ 73749958 (-)
G182648 NA non-coding downstream 143068 73233202 ~ 73265698 (-)
G182553 NA non-coding downstream 294886 73107475 ~ 73113880 (-)
G182554 NA non-coding downstream 295321 73107133 ~ 73113445 (-)
G182552 NA non-coding downstream 295425 73107045 ~ 73113341 (-)
G182494 NA non-coding downstream 342042 73011478 ~ 73066724 (-)
G182820 NA non-coding upstream 150954 73561915 ~ 73562219 (-)
G182821 NA non-coding upstream 151971 73562932 ~ 73563178 (-)
G182824 NA non-coding upstream 154321 73565282 ~ 73565492 (-)
G182826 NA non-coding upstream 156048 73567009 ~ 73567506 (-)
G182829 NA non-coding upstream 159241 73570202 ~ 73570423 (-)
G182708 NA other downstream 62919 73344950 ~ 73345847 (-)
LOC110495704 nrg4 other downstream 330387 73076020 ~ 73078379 (-)
c2cd4a LOC106561196 other downstream 535021 72833292 ~ 72877678 (-)
G180716 NA other downstream 1297103 72110968 ~ 72111663 (-)
G182882 NA other upstream 265251 73676212 ~ 73676423 (-)
G183096 NA other upstream 582117 73993078 ~ 73993545 (-)
G183538 NA other upstream 695922 74106883 ~ 74110791 (-)
G184006 LOC106561202 other upstream 1319911 74730872 ~ 74732637 (-)
LOC110496186 LOC106561212 other upstream 2195266 75595366 ~ 75607735 (-)

Expression


Co-expression Network