Gene
RNA
| Item | Value |
|---|---|
| gene id | G182154 |
| gene name | LOC108230026 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 73635627 ~ 73636093 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ras-specific guanine nucleotide-releasing factor 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU206699 | True | 438 | lncRNA | 0.45 | 2 | 73635627 | 73636093 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501876 | LOC106561170 | coding | upstream | 57447 | 73456669 ~ 73580075 (+) |
| trnah-gug-2 | NA | coding | upstream | 180124 | 73455432 ~ 73455503 (+) |
| malt3 | LOC106561168 | coding | upstream | 180765 | 73436134 ~ 73454862 (+) |
| slc28a1 | LOC106561167 | coding | upstream | 216789 | 73409052 ~ 73418838 (+) |
| LOC110495840 | LOC106561167 | coding | upstream | 229840 | 73400259 ~ 73405787 (+) |
| LOC110495913 | ankrd34c | coding | downstream | 97302 | 73733395 ~ 73737729 (+) |
| idh2 | LOC100194640 | coding | downstream | 120879 | 73756972 ~ 73768531 (+) |
| LOC110495946 | LOC106561177 | coding | downstream | 247458 | 73883551 ~ 73984737 (+) |
| LOC110495967 | LOC106573468 | coding | downstream | 363176 | 73999269 ~ 74010559 (+) |
| LOC110495989 | LOC106573469 | coding | downstream | 433871 | 74069964 ~ 74110824 (+) |
| G182037 | NA | non-coding | upstream | 47962 | 73587104 ~ 73587665 (+) |
| G182124 | NA | non-coding | upstream | 61706 | 73573605 ~ 73573921 (+) |
| G182020 | NA | non-coding | upstream | 220906 | 73413662 ~ 73414721 (+) |
| G181965 | NA | non-coding | upstream | 268644 | 73365579 ~ 73366983 (+) |
| G181994 | NA | non-coding | upstream | 295555 | 73339463 ~ 73340072 (+) |
| G182155 | LOC106573487 | non-coding | downstream | 457 | 73636550 ~ 73636988 (+) |
| G182209 | NA | non-coding | downstream | 70239 | 73706332 ~ 73766435 (+) |
| G183089 | NA | non-coding | downstream | 354444 | 73990537 ~ 73991061 (+) |
| G182144 | NA | other | upstream | 11109 | 73622536 ~ 73624518 (+) |
| G182139 | LOC106561173 | other | upstream | 25390 | 73606892 ~ 73610237 (+) |
| G181995 | NA | other | upstream | 293350 | 73341380 ~ 73342277 (+) |
| LOC110533853 | LOC106561194 | other | upstream | 1381900 | 72250884 ~ 72253809 (+) |
| G183361 | NA | other | downstream | 893556 | 74529649 ~ 74535026 (+) |
| LOC110496107 | LOC106561202 | other | downstream | 1075488 | 74660359 ~ 74732682 (+) |
| LOC110496116 | LOC106561204 | other | downstream | 1250005 | 74828267 ~ 74890826 (+) |
| LOC110496136 | LOC106561223 | other | downstream | 1401159 | 74991655 ~ 75145608 (+) |
| LOC110496459 | LOC106561246 | other | downstream | 2531564 | 76167573 ~ 76181555 (+) |
