G182155 (LOC106573487)


Basic Information

Item Value
gene id G182155
gene name LOC106573487
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73636550 ~ 73636988 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU206700
TGTTGAGGAAGATGCTGCTGACGTCGTCATGGGTGAtgggtggtttcttggagctggcGGCCATACGGAGCGGTCGGAGGAAATTGTTGACCAGGATGTGGAGCTGCTGGACGTACTCAGCCTCAGAGTCCAGCATGCTGAACACCACCTGGTTCCTCTTCCTCATGCTCTCGGCGTGGGGAGACCGGATGTAGTCCTGGATGATGGTCTTCCACTTCCTCCTGCACATCCAGCCTCGTAGGAAACTCTGCACttttttattttcttgagTTCAGAGTCATCATCTTCACTGGGGTCGGCTGTTGGACTCGACTGGATCTTCCCATTGTCTTTGTGCA

Function

NR:

description
ras-specific guanine nucleotide-releasing factor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206700 True 338 lncRNA 0.42 2 73636550 73636988

Neighbor

gene id symbol gene type direction distance location
LOC110501876 LOC106561170 coding upstream 58370 73456669 ~ 73580075 (+)
trnah-gug-2 NA coding upstream 181047 73455432 ~ 73455503 (+)
malt3 LOC106561168 coding upstream 181688 73436134 ~ 73454862 (+)
slc28a1 LOC106561167 coding upstream 217712 73409052 ~ 73418838 (+)
LOC110495840 LOC106561167 coding upstream 230763 73400259 ~ 73405787 (+)
LOC110495913 ankrd34c coding downstream 96407 73733395 ~ 73737729 (+)
idh2 LOC100194640 coding downstream 119984 73756972 ~ 73768531 (+)
LOC110495946 LOC106561177 coding downstream 246563 73883551 ~ 73984737 (+)
LOC110495967 LOC106573468 coding downstream 362281 73999269 ~ 74010559 (+)
LOC110495989 LOC106573469 coding downstream 432976 74069964 ~ 74110824 (+)
G182154 LOC108230026 non-coding upstream 457 73635627 ~ 73636093 (+)
G182037 NA non-coding upstream 48885 73587104 ~ 73587665 (+)
G182124 NA non-coding upstream 62629 73573605 ~ 73573921 (+)
G182020 NA non-coding upstream 221829 73413662 ~ 73414721 (+)
G181965 NA non-coding upstream 269567 73365579 ~ 73366983 (+)
G182209 NA non-coding downstream 69344 73706332 ~ 73766435 (+)
G183089 NA non-coding downstream 353549 73990537 ~ 73991061 (+)
G183091 NA non-coding downstream 354377 73991365 ~ 73991640 (+)
G182144 NA other upstream 12032 73622536 ~ 73624518 (+)
G182139 LOC106561173 other upstream 26313 73606892 ~ 73610237 (+)
G181995 NA other upstream 294273 73341380 ~ 73342277 (+)
LOC110533853 LOC106561194 other upstream 1382823 72250884 ~ 72253809 (+)
G183361 NA other downstream 892661 74529649 ~ 74535026 (+)
LOC110496107 LOC106561202 other downstream 1074593 74660359 ~ 74732682 (+)
LOC110496116 LOC106561204 other downstream 1249110 74828267 ~ 74890826 (+)
LOC110496136 LOC106561223 other downstream 1400264 74991655 ~ 75145608 (+)
LOC110496459 LOC106561246 other downstream 2530669 76167573 ~ 76181555 (+)

Expression


Co-expression Network