G182209


Basic Information

Item Value
gene id G182209
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73706332 ~ 73766435 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU206757
gaacaacatttattggatatttcaaacttttttaacaaatcaaaaactaaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggatttaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcatcgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccggatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgcatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttcaatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccagctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatccggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgca

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206757 True 1264 lncRNA 0.43 2 73706332 73766435

Neighbor

gene id symbol gene type direction distance location
LOC110501876 LOC106561170 coding upstream 128152 73456669 ~ 73580075 (+)
trnah-gug-2 NA coding upstream 250829 73455432 ~ 73455503 (+)
malt3 LOC106561168 coding upstream 251470 73436134 ~ 73454862 (+)
slc28a1 LOC106561167 coding upstream 287494 73409052 ~ 73418838 (+)
LOC110495840 LOC106561167 coding upstream 300545 73400259 ~ 73405787 (+)
LOC110495946 LOC106561177 coding downstream 117116 73883551 ~ 73984737 (+)
LOC110495967 LOC106573468 coding downstream 232834 73999269 ~ 74010559 (+)
LOC110495989 LOC106573469 coding downstream 303529 74069964 ~ 74110824 (+)
LOC110495996 LOC106561183 coding downstream 359788 74126223 ~ 74139502 (+)
LOC110496029 LOC106561185 coding downstream 412048 74178483 ~ 74198686 (+)
G182155 LOC106573487 non-coding upstream 69344 73636550 ~ 73636988 (+)
G182154 LOC108230026 non-coding upstream 70239 73635627 ~ 73636093 (+)
G182037 NA non-coding upstream 118667 73587104 ~ 73587665 (+)
G182124 NA non-coding upstream 132411 73573605 ~ 73573921 (+)
G182020 NA non-coding upstream 291611 73413662 ~ 73414721 (+)
G183089 NA non-coding downstream 224102 73990537 ~ 73991061 (+)
G183091 NA non-coding downstream 224930 73991365 ~ 73991640 (+)
G183099 NA non-coding downstream 228720 73995155 ~ 73995604 (+)
G183100 NA non-coding downstream 229247 73995682 ~ 73995943 (+)
G182144 NA other upstream 81814 73622536 ~ 73624518 (+)
G182139 LOC106561173 other upstream 96095 73606892 ~ 73610237 (+)
G181995 NA other upstream 364055 73341380 ~ 73342277 (+)
LOC110533853 LOC106561194 other upstream 1452605 72250884 ~ 72253809 (+)
G183361 NA other downstream 763214 74529649 ~ 74535026 (+)
LOC110496107 LOC106561202 other downstream 945146 74660359 ~ 74732682 (+)
LOC110496116 LOC106561204 other downstream 1119663 74828267 ~ 74890826 (+)
LOC110496136 LOC106561223 other downstream 1270817 74991655 ~ 75145608 (+)
LOC110496459 LOC106561246 other downstream 2401222 76167573 ~ 76181555 (+)

Expression


Co-expression Network