G183100


Basic Information

Item Value
gene id G183100
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73995682 ~ 73995943 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU207720
ATAGACCCCcctgccctggacaccatatgtgaattgattgccccccatctatcgtcGGAGTTcgtactgctaggtgacctaaattgggatatgcgtgacaccccggccatcctacaatctaagctataTGCTCTCAATCTCAGACAAATTAtgaaggaacctaccaggtacaaccccaaatctgtaaacatgggcaccctcatatatATCaacctgaccaacttgccctctgaATACACCTCTGctatcttcaaccaggatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207720 True 262 lncRNA 0.47 1 73995682 73995943

Neighbor

gene id symbol gene type direction distance location
LOC110495946 LOC106561177 coding upstream 10945 73883551 ~ 73984737 (+)
idh2 LOC100194640 coding upstream 227151 73756972 ~ 73768531 (+)
LOC110495913 ankrd34c coding upstream 257953 73733395 ~ 73737729 (+)
LOC110501876 LOC106561170 coding upstream 417502 73456669 ~ 73580075 (+)
trnah-gug-2 NA coding upstream 540179 73455432 ~ 73455503 (+)
LOC110495967 LOC106573468 coding downstream 3326 73999269 ~ 74010559 (+)
LOC110495989 LOC106573469 coding downstream 74021 74069964 ~ 74110824 (+)
LOC110495996 LOC106561183 coding downstream 130280 74126223 ~ 74139502 (+)
LOC110496029 LOC106561185 coding downstream 182540 74178483 ~ 74198686 (+)
LOC110496053 LOC106561188 coding downstream 214520 74210463 ~ 74221530 (+)
G183099 NA non-coding upstream 78 73995155 ~ 73995604 (+)
G183091 NA non-coding upstream 4042 73991365 ~ 73991640 (+)
G183089 NA non-coding upstream 4621 73990537 ~ 73991061 (+)
G182209 NA non-coding upstream 229247 73706332 ~ 73766435 (+)
G183101 NA non-coding downstream 761 73996704 ~ 73997226 (+)
G183108 NA non-coding downstream 19648 74015591 ~ 74015797 (+)
G183117 NA non-coding downstream 20071 74016014 ~ 74016360 (+)
G183119 LOC106561179 non-coding downstream 22230 74018173 ~ 74034081 (+)
G183152 NA non-coding downstream 64953 74060896 ~ 74129871 (+)
G182144 NA other upstream 371164 73622536 ~ 73624518 (+)
G182139 LOC106561173 other upstream 385445 73606892 ~ 73610237 (+)
G181995 NA other upstream 653405 73341380 ~ 73342277 (+)
LOC110533853 LOC106561194 other upstream 1741955 72250884 ~ 72253809 (+)
G183361 NA other downstream 533706 74529649 ~ 74535026 (+)
LOC110496107 LOC106561202 other downstream 715638 74660359 ~ 74732682 (+)
LOC110496116 LOC106561204 other downstream 890155 74828267 ~ 74890826 (+)
LOC110496136 LOC106561223 other downstream 1041309 74991655 ~ 75145608 (+)
LOC110496459 LOC106561246 other downstream 2171714 76167573 ~ 76181555 (+)

Expression


Co-expression Network