G183544


Basic Information

Item Value
gene id G183544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74019259 ~ 74020096 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU208244
CTATTTGTACTGGGTGTCGTCGGAAACAGGTCCTCACTTACCTTAGCACAGCTCAATCTCCTTAACTCTTtatggcccaCAGATGCATTCTCCTTAACTGGATTAAAGACCAGCCACCCACAATAAATCAGTGGTACTGTGAGATCTTTAAAGTGCTGCCACAGGAGAAAATGTGTGCTATATTTAGGAACAAGGAAGGACACCCTATATATATTATGTGACCCTTTTAACTATCTCTTCACCCTAATCTCGCAGATACCCTGAGAAGTGTTAATATAAAAAAGGCTGTGAGTCAGGTCTTCTGTTGATACAACTGAACTCTTTGATATACTACAGCCACACACAACAGTCAAATTAATAAAGGCATGTAATGAAAGATGACTCCAGGTTGAATGAAAAGAAAGATTGTTAAGGGTAATGGAAGATTGTAAGAGAGCAGAGAACTGAAAGTGAATGTTTAaatcttgttttttttgtgtgtgtgtgtttttgtttactgtcACTGTTTTATGTTACCTTATATCTACATATATACCATTTGTTTGTGATGTTGACCTGAaacaaggaaaaataaataataaaaatatgtatttaaaaaGACAACTTTGGTGAGGGCTTAACAAGAAACTGCCATATATTTGTTGTATA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU208244 True 648 lncRNA 0.49 2 74019259 74020096

Neighbor

gene id symbol gene type direction distance location
LOC110495977 NA coding downstream 4846 74010498 ~ 74014413 (-)
LOC110495933 zn710 coding downstream 243811 73768584 ~ 73775448 (-)
si:ch211-107o10.3 LOC106561176 coding downstream 269301 73739182 ~ 73749958 (-)
rasgrf1 LOC106561174 coding downstream 373123 73610274 ~ 73646136 (-)
ctsh LOC106561173 coding downstream 409142 73606889 ~ 73610117 (-)
LOC110501884 NA coding upstream 91882 74111978 ~ 74112847 (-)
LOC118941541 NA coding upstream 98970 74119058 ~ 74140876 (-)
LOC110496007 LOC106561184 coding upstream 102187 74122283 ~ 74126209 (-)
LOC110496015 LOC106561186 coding upstream 136977 74157073 ~ 74167350 (-)
LOC110501892 LOC106561189 coding upstream 221141 74241237 ~ 74433222 (-)
G183098 NA non-coding downstream 24258 73994721 ~ 73995001 (-)
G183092 NA non-coding downstream 27584 73991340 ~ 73991675 (-)
G183084 LOC106561177 non-coding downstream 32194 73981328 ~ 73987065 (-)
G182903 NA non-coding downstream 315167 73703765 ~ 73704092 (-)
G183602 NA non-coding upstream 120941 74141037 ~ 74143053 (-)
G183631 NA non-coding upstream 124489 74144585 ~ 74144786 (-)
G183672 LOC106561185 non-coding upstream 176776 74196872 ~ 74198670 (-)
G183601 LOC106561188 non-coding upstream 195221 74215317 ~ 74221649 (-)
G183096 NA other downstream 25714 73993078 ~ 73993545 (-)
G182882 NA other downstream 342836 73676212 ~ 73676423 (-)
G182708 NA other downstream 673412 73344950 ~ 73345847 (-)
LOC110495704 nrg4 other downstream 940880 73076020 ~ 73078379 (-)
G182494 NA other downstream 952535 73011478 ~ 73066724 (-)
G183538 NA other upstream 86787 74106883 ~ 74110791 (-)
G184006 LOC106561202 other upstream 710776 74730872 ~ 74732637 (-)
LOC110496186 LOC106561212 other upstream 1586131 75595366 ~ 75607735 (-)
G186002 NA other upstream 1857263 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 1965063 75985156 ~ 75989573 (-)

Expression


Co-expression Network