G183152


Basic Information

Item Value
gene id G183152
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74060896 ~ 74129871 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU207780
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgGGTGTCTTCAGGTGTCTGGTGCTTGGGTTCGTCGGTGCGTCAAGGTCGCTGCGGATCAGCTGATCTGCAGCTCCTGGCTCTGCTCACCAGGCCCGACTGACTGGGTCCTGCGAGGTCATGCTGAGAGTCAGTACCTGCGAGGGGACAGACTCCCAACACCCCCTACCAGGACATGGCCAGGGACCCAGTGACCTGCCCTTGGGAGCAGGCTTttcatctcctttcctcctcctcctcctctcctcctcttcactGCTGTCTCTTAGCAAAATACAGTATGTGTTTACCAGGGTCACTCTCATTAGGATGTAACTACATAAACATTACAGAtacagatgtatgatcttaatttgatcacccagttgcaggagaactttcctacAATCCAGGGAATGTGGAACTtgttgtgtatttgaggtttaaaaaggcttctgaagtttgtaatttccactttgacatttcagacttgatgttcacttacaaaaaatgtatcaaccttgACAAAAATCTCCATGAATTATAATGCAC
>TU207781
ATTTGGGAATGCGTTTTCATGTTGCAatgtttttttcaatttttatttaAAATTTTACATTTTCATGGAAATTATGCGTTCAGCATTGTAGTGTATTTGGGAATGCGTTTTCTTCAGCAGGCCCCCCATGAGCCGCCGAAACCAAGCAACGCAGACAACCAGAAGCCAACCAAAAAAAGAAAAGAATGGTTCTTCATCTGGCGGCATTCTAGGGTACATTTCGTTTAATTATTCAGGTAAGTAGTATAAGCTTTGTGCTTCGGATGAGCTTCATCTAGTCGTCTCAGGTGTCTTCAGGTGTCTGGTGCTTGGGTTCGTCGGCTGTCTCTTAGCAAAATACAGTATGTGTTTACCAGGGTCACTCTCATTAGGATGTAACTACATAAACATTACAGAtacagatgtatgatcttaatttgatcacccagttgcaggagaactttcctacAATCCAGGGAATGTGGAACTtgttgtgtatttgaggtttaaaaaggcttctgaagtttgtaatttccactttgacatttcagacttgatgttcacttacaaaaaatgtatcaaccttgACAAAAATCTCCATGAATTATAATGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207780 False 582 lncRNA 0.52 3 74060896 74129871
TU207781 True 594 lncRNA 0.37 3 74116086 74129871

Neighbor

gene id symbol gene type direction distance location
LOC110495967 LOC106573468 coding upstream 50337 73999269 ~ 74010559 (+)
LOC110495946 LOC106561177 coding upstream 76159 73883551 ~ 73984737 (+)
idh2 LOC100194640 coding upstream 292365 73756972 ~ 73768531 (+)
LOC110495913 ankrd34c coding upstream 323167 73733395 ~ 73737729 (+)
LOC110501876 LOC106561170 coding upstream 482716 73456669 ~ 73580075 (+)
LOC110496029 LOC106561185 coding downstream 48612 74178483 ~ 74198686 (+)
LOC110496053 LOC106561188 coding downstream 80592 74210463 ~ 74221530 (+)
LOC110496089 LOC105018423 coding downstream 389905 74519776 ~ 74529599 (+)
LOC110496107 LOC106561202 coding downstream 530488 74660359 ~ 74732682 (+)
LOC110496116 LOC106561204 coding downstream 698396 74828267 ~ 74890826 (+)
G183119 LOC106561179 non-coding upstream 26815 74018173 ~ 74034081 (+)
G183117 NA non-coding upstream 44536 74016014 ~ 74016360 (+)
G183108 NA non-coding upstream 45099 74015591 ~ 74015797 (+)
G183101 NA non-coding upstream 63670 73996704 ~ 73997226 (+)
G183100 NA non-coding upstream 64953 73995682 ~ 73995943 (+)
G183168 NA non-coding downstream 11476 74141347 ~ 74141645 (+)
G183175 NA non-coding downstream 25375 74155246 ~ 74155558 (+)
G183176 NA non-coding downstream 25973 74155844 ~ 74156345 (+)
G183177 LOC106561186 non-coding downstream 26751 74156622 ~ 74226257 (+)
G183182 NA non-coding downstream 43764 74173635 ~ 74177682 (+)
G182144 NA other upstream 436378 73622536 ~ 73624518 (+)
G182139 LOC106561173 other upstream 450659 73606892 ~ 73610237 (+)
G181995 NA other upstream 718619 73341380 ~ 73342277 (+)
LOC110533853 LOC106561194 other upstream 1807169 72250884 ~ 72253809 (+)
G183361 NA other downstream 399778 74529649 ~ 74535026 (+)
LOC110496136 LOC106561223 other downstream 907381 74991655 ~ 75145608 (+)
LOC110496459 LOC106561246 other downstream 2037786 76167573 ~ 76181555 (+)

Expression


Co-expression Network