G183538


Basic Information

Item Value
gene id G183538
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74106883 ~ 74110791 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU208238
gagACATTAATACATTTTGTAGTATTTTTCTAGAGGAAAAGTTGGTGATAAAGCATCCCTCACAGACaattgcaaatatatatatatatatattacatttaccTTTCGTCAAGTAGAGGCTTCTTGTCTGTCTTGAATAGATTGAGGAAATTGGGCAAAGAAggaagcaaaaaaaaaagaatagtTACACAAATTTGTTCTCAAAAGTCGACAATCTGTAGTGATTTATACTAGACAAGAGATTTTATTTCACATTTCTATTGAGACATTTAATTTACCAATATCAACAAAGTAAATGCACCAGCAACAGCGagacaataaacaaaaaaatattctAGAGTTGTTTGATTTGTAAGCAATATGCACATTAAATGGCATTTTGCATTTCAAGAGCACATTGTGGATGTCTTAACAGTTTTCAAGGACCTTTAGCCACAAAGCTGTAGTCCTACACATGAAAAATAAAATTTAGGGACCAATAATTTGAGTACATATATTTTGTTTCACCTGAATCATGCAATCAAATCAATTATGAAAGATAACATTATGTTAAAGCCAATGTGACTCAGATTTTCCTATTAGAAGGCACCTCGCTAACTCCTGCGTATATCACAATTAGCACTTATTCAGATGAATATGGCTCAGTCCAATactgcacacagagacagtgGTCTGTACTAGTCTCATATCTGGTCATGTGCTTTCCAGAATACCACAGTCAGTAGCATATATTTAATTTATTACATTTAGAATTcaacaataaaaaaagaacccAAACTGTGACAGAAAACTTCCACTATGTGTACATGTCAGGGATGAATCTAGCCCAGTCAAGCACTTCTGAGAGACCTTTCAGACATGTTTCTATACGGAGCTCTGAAACAGTGGTGAAGAATGGTAATGGATGAAAAAAAAGGCCCTTAACATAGTCACAATTCATTTTCTATACTCCATTCATGATTATCAAACAGTTATCCACAGAGCACTCATGAGGGAAACGAACAGAAATTAACCTATCACAAACACAAAATAattaaggcctagattcaatcggATCAAGCGTTAAGCGGTGACAGCAGACAGATGTTGTGGCCCTCTCAGACAGATGTTGTGGCTGCTCTTGCAACCATTGTCACAAAGCCACAACCGCCCCACTCGCGTTAGATGTTCAGAAGGAGAAAGTGTAGGTTATACAGGAATAATGACGCTCAACTTGAAAAATCGTTAAACTAAATAATGAGGGTTTCTATCATCATAATCAAGGTGCAGATTACATTACACGTTACACTGTTCCATCGTGTAAACAAGACGGCATGAGATTTCTGTTAATGCGACTCCGTGTAGTCAAATGCAATGTTGGCTTTATCTATAATGCAgggagccacttgtggatttgacagctctaacagcTCCACCTCATAGACCGTCAAAACAAACGATATGCGGATGTTCGCTAAAGCAGATCTGATTGAATCGAGCCCCAACTCACAGACCGTCAAAACAAACGCTATGCGGATGTTCGCTAAAGCAGATCTGATTGAATCGAGCCCCAACTCACAGACCGTCAAAACAAACGCTATGCGGATGTTCGCTAAAGCAGATCTGATTGAATCGAGCCCCAACTCACAGACCGTCAAAACAAACGCTATGCGGATGTTCGCTAAAGCAGATCTGATTGAATCGAGCCCCAACTCACAGACCGTCAAAACAAACGCTATGCGGATGTTCGCTAAAGCAGATCTGATTGAATCGAGCCCCAACTCACAGACCGTCAAAACAAACGCTATGCGGATGTTCGCTAAAGCAGATCTGATTGAATCGAGCCCCAACTCACATGGTAGAGGAATAGATCAACAATGTAAAAAGACGTGCAGACATATAAGACGCAGTATTGAAAGCATTATATATTAACATAAATTATGCATTTCCTTCAACCCCCAAAAATGTGAACTAAAATACATGATCCTAAAACATTATATTAAATTGAGCAGATTAAAAAAAGAGAGATTACATTACGTTTCAGAAAGTCAATATCAGAGACATGAAAATGTGTTAATGGTGTGTTAAGGCAAAATGAACTATCTTCCCTTTACATTTAAGACAGCAATTAAGTAGCAAGATAGTGTACACAGACACTCACGTTGATTTCATTACTGCTTACGAGTAGTCACTGTATTTGAAAAAATATATGTCTTCAAGCCACAGATAATCAAAGTGAACTGTATGAAATCCCAAGTGATGACGACAGGTACACCCAGAGAGGTTCAGTTAATGTGGTCCAGTTTGTGTAAATGCATCTACTGTAGACAAACACACCCAGTAGCCCAATGTTGTAATGGAACATTCACTGATTCAAACTGAAAATAAACTGTCCCATCTTGCTGAGGTGAAATCTAGTAGACTGCTACAGCAACATTAAGAAATACAATGTTACcaatggttaccacagcattttCCTACAGAGCAGTTTCAACAGCAAGAGTGAAGAAGTTCACACAAATCTCATCTTTGAACTATGATTCATCTCTGATCTATCGAACCTAAACCAGGTTGAAATCCAAAGACACCAAAAGCTTCAAAATATTGAATTTCATCACTGCACGGAAGCAATCCTGTTTCTTGCTGGGCTGATAGAATACATCACACAGGCACAAGCTTTGTAATATAAAAATGGCTTTTGGAAGTACTGTTAAATGCTCTGGCATTCCACTCAGTCTCACAAATGTATTGGACTATTGATCAAGGTAATAAAATATTCATTAATATTGTATGAACTGTATTACTATCATCAAAAGGTCAGAGAATACTGGCTCAAACAATGAGAATAATTTATCCAGAAGGATAAGAAGGTAATAGAATGCCATAACAATCCAAAAATATTACTTTGGCGTTTGATTGCAGTTCTTATTCAGATTAGTGTTCTTTCAGTAATGTAGTGGTTTAAACAGAAACATGGGAGTATACTGTATGACTAAGATGGCATTTTACTATATCATACAAATATCAAGCATTGAGGGGGCAGTTGTTTCCAATCCCATGGCCCATATTTGATGAAGCAGAATGGCTCAATTACTGTAAACAGGAACTACAGACTGAACGTGAAATGTGGGTCAGAGGCGATTTGACTGGCATGTCtgattaatgacatgtactgtatcATCAACTTTAACAAATAGAGAAATTATCAACTCAAACAGTTCACTTCTTGTTCATAGAGGTCTGAGATATTTCCACATAACATTGCATATCTTCCAGCGTCCCCTAATCTTAATCCAGTGATTACAACCCTCTCTATAGAAATCAAGATCTTATATCACTATTTTACATCTATACATTCAGTGAAACAACAAACCGCAAATTGTACTGGGTACTTAAATATAGCATGGATAGAAGACTGGGTGTGAAGAGCATTTATTCTCATCTGTCCTTATGATTGTACCATCAAACTAAGTCTTTCTGTGTAGTCATGGCAATAGACCAAACGTTAAAAGCATTGGGCAGGAGAGTTCACGTACATTAACATTATGGGTAGAAAAAGGAATTTGGCTTAAATTGCCAGCCATTACAACAACACTCGTCCTCAAAAAATGATTCATTTGATCACGAGTCGCTGGTCTTGGCCCACTTCATATAAGagaacctctctcctctcttccatcaaCACTTGGAGGAATAAAGTGAATGTGTGATTCATATGTGATTAAACACTCCAGACCCAGGCTCGGCTGGTCAGTCTTTTGGTCCGTTGATAAAATAGCACCCTGTGGCAGCAGGGTGCAGGCCAGTCACTATGAAGGGGCCTGGATACGGTCATAGTCCAGGATCAGACCTTTGATGTGAGACAGTTTCTGATGCAGATACTCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208238 True 3866 TUCP 0.38 3 74106883 74110791
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110495986 LOC106561179 coding downstream 39773 74018519 ~ 74067110 (-)
LOC110495977 NA coding downstream 92470 74010498 ~ 74014413 (-)
LOC110495933 zn710 coding downstream 331435 73768584 ~ 73775448 (-)
si:ch211-107o10.3 LOC106561176 coding downstream 356925 73739182 ~ 73749958 (-)
rasgrf1 LOC106561174 coding downstream 460747 73610274 ~ 73646136 (-)
LOC110501884 NA coding upstream 1187 74111978 ~ 74112847 (-)
LOC118941541 NA coding upstream 8275 74119058 ~ 74140876 (-)
LOC110496007 LOC106561184 coding upstream 11492 74122283 ~ 74126209 (-)
LOC110496015 LOC106561186 coding upstream 46282 74157073 ~ 74167350 (-)
LOC110501892 LOC106561189 coding upstream 130446 74241237 ~ 74433222 (-)
G183544 NA non-coding downstream 86787 74019259 ~ 74020096 (-)
G183098 NA non-coding downstream 111882 73994721 ~ 73995001 (-)
G183092 NA non-coding downstream 115208 73991340 ~ 73991675 (-)
G183084 LOC106561177 non-coding downstream 119818 73981328 ~ 73987065 (-)
G183602 NA non-coding upstream 30246 74141037 ~ 74143053 (-)
G183631 NA non-coding upstream 33794 74144585 ~ 74144786 (-)
G183672 LOC106561185 non-coding upstream 86081 74196872 ~ 74198670 (-)
G183601 LOC106561188 non-coding upstream 104526 74215317 ~ 74221649 (-)
G183096 NA other downstream 113338 73993078 ~ 73993545 (-)
G182882 NA other downstream 430460 73676212 ~ 73676423 (-)
G182708 NA other downstream 761036 73344950 ~ 73345847 (-)
LOC110495704 nrg4 other downstream 1028504 73076020 ~ 73078379 (-)
G182494 NA other downstream 1040159 73011478 ~ 73066724 (-)
G184006 LOC106561202 other upstream 620081 74730872 ~ 74732637 (-)
LOC110496186 LOC106561212 other upstream 1495436 75595366 ~ 75607735 (-)
G186002 NA other upstream 1766568 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 1874368 75985156 ~ 75989573 (-)
adm2b adm2 other upstream 1982379 76093170 ~ 76099909 (-)

Expression

G183538 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

G183538 Expression in each Bioproject

Bar chart with 20 bars.
G183538 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network