G183602


Basic Information

Item Value
gene id G183602
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74141037 ~ 74143053 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU208303
GCGCCGGCTCATTCCATCCACTGGAGGCTGTTACTGTCCGTAAGGTGAGCGTGTACTTGGCATCCGTAGTTGGAGTAGGCGCTCAcccccctctctgccctccggTGGATGATTGAAGATACCTCTGAACAAAGCCATGAACCCCTCATACAAAGCaagcttctcctctcttctctcccagaCGGCCATAGCCCACTCCAACACCCGCccagtcagcagagaaataaccATGGCAACCTTGGACTTCTCGGTGGTGGGGCTCCCATCTGGTGAGCaaaatagagggagcactggagTAGGAAGCCACGGCATTTAGATGAGGTTCCGTCATATTTGTCCGGGAGGGACAAACGGGCATCGCTGATCTGGGCGGACTGCTGTATGGACTGGTGTGCTGGCTCGCTGAGTCGACTGGTTGTAGAGTATCCTCTGCTAGTTGAAGGCAATGCCGCTCGGGTATGTTCGAGATGTTGAAGAACCAAGGACCTCATCCACAGCCATCCCCAGTTGCGCCAGCTGGTCGTGGTGTTGATGAAGTAGGTTAACCTGTTCGTGGACCGTCTGGGAGATATCCTGATTCCCTGCTTCTTCCATTTGTTGAGGCAATACTCTATAACGGAGATGCTGGGACTTGAGAACAGGTGCAGGTGGTGAGTTTAATAAAGCAATAAACAtggaacaatacaaaacaagagtAGCGTCTGGACAGGAAACAAATAACCCATACTGCCTGAAGAATGGAAcgaagggagtgacagatataggggaggtaagaGCGGGAGCAGAAGTGacactgcccttctttatgaggcttcGAAAAGCTCTCTGGTCTTTATAGTTGAATCTGTACTTGAAATGCAATACTTGACTTAGTGACCTTACATATGTTGgcatgggggacagaggaagagggtATTGGTCACATGTGCTCcatctccggcctctaggtcaccaggctgctcatttatggcgcacacctgtcaccagcgttacGCGCATTTGCGCATAATGCCACTCAcatggactccatcacctccttgattacctgccctttatatgtcactccctttggtttcttccccagtcgtcattgtttctcttcctgtttcatgtcggtgagctgtttgtgtttcttgttttgttaattaattaattcaatgtattcactccctgaacttgcttcccgactctctgCGTATATCGTTACAGTAGTCCTTAAAAATCATGTCAATCCCTATTATTTtacagtgagtccatgtaacttattatgttcaaaaaaatgtaattcaacATTTTGTCTTTCCTTAACAAAGgaaatacttacagtaccagtcaaacgtttggacaaacctactcattccagggtttttctttatttttactattttctacattgtagaaaattatgaaataacacatatggaatcatgcagtaaccaaaaaggtgttaaacaaatgtatatttgagattcttcaaagtagccaccctttgccttgatgacagctttgcacgctcttggcattctctcaaccagcttcatgaggtagtcacctggaatgcatttcatttaacagttgtgccttgttaaaaattaatttgtgggatttctttccttcgtaatgcatttgagccaatcagttgtgttgtgacaaggtagggatggtacacaggagatagccctatttggtaaaagaccaagtctatattatggcaaaaacagctcaaataagcaaagggaaatgacagtccatcattactttaagacatgaagttcagtcaatccagaaaatgtcaagaactttcttcaaggtcagtcgcaaaaaccatcaagctctatgatgaaactggctctcatgaggaacgctacaggaaaggaagacccagagttaccattGCTTCAGAGGATAGGAtcattcgagttaccagcctcaaatttcagcccaaataaatgcttcacagatttcaagtaacatTAATTGATCAGAAGAGACTGCGTGTATCAGgttttcatggtcg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562023

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208303 True 2017 lncRNA 0.49 1 74141037 74143053

Neighbor

gene id symbol gene type direction distance location
LOC118941541 NA coding downstream 161 74119058 ~ 74140876 (-)
LOC110496007 LOC106561184 coding downstream 14828 74122283 ~ 74126209 (-)
LOC110501884 NA coding downstream 28190 74111978 ~ 74112847 (-)
LOC110495986 LOC106561179 coding downstream 73927 74018519 ~ 74067110 (-)
LOC110495977 NA coding downstream 126624 74010498 ~ 74014413 (-)
LOC110496015 LOC106561186 coding upstream 14020 74157073 ~ 74167350 (-)
LOC110501892 LOC106561189 coding upstream 98184 74241237 ~ 74433222 (-)
LOC110496063 LOC106561200 coding upstream 309479 74452532 ~ 74473316 (-)
LOC118937295 NA coding upstream 358361 74501414 ~ 74508105 (-)
LOC110496093 LOC106561201 coding upstream 390232 74533285 ~ 74594426 (-)
G183544 NA non-coding downstream 120941 74019259 ~ 74020096 (-)
G183098 NA non-coding downstream 146036 73994721 ~ 73995001 (-)
G183092 NA non-coding downstream 149362 73991340 ~ 73991675 (-)
G183631 NA non-coding upstream 1532 74144585 ~ 74144786 (-)
G183672 LOC106561185 non-coding upstream 53819 74196872 ~ 74198670 (-)
G183601 LOC106561188 non-coding upstream 72264 74215317 ~ 74221649 (-)
G183714 NA non-coding upstream 142556 74285609 ~ 74286314 (-)
G183538 NA other downstream 30246 74106883 ~ 74110791 (-)
G183096 NA other downstream 147492 73993078 ~ 73993545 (-)
G182882 NA other downstream 464614 73676212 ~ 73676423 (-)
G182708 NA other downstream 795190 73344950 ~ 73345847 (-)
LOC110495704 nrg4 other downstream 1062658 73076020 ~ 73078379 (-)
G184006 LOC106561202 other upstream 587819 74730872 ~ 74732637 (-)
LOC110496186 LOC106561212 other upstream 1463174 75595366 ~ 75607735 (-)
G186002 NA other upstream 1734306 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 1842106 75985156 ~ 75989573 (-)
adm2b adm2 other upstream 1950117 76093170 ~ 76099909 (-)

Expression


Co-expression Network