G183176


Basic Information

Item Value
gene id G183176
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74155844 ~ 74156345 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU207806
ATCATATAACTTTCCTCCATGGACTGGATACAGGATAAGAGGGAGAACAAAACCCAAAACCAACCCCCATTCACCAAACAAAACATACCAAGTTTACAGACTAGCCTGACCATCAAGGCCCAATCAGGGTGTCACAGCGTCTAAAGGCTTGTGTAGTGCATGAGAGCAATGTAAATAATTCCTAAGAAGTCCACCCTGTACAGATATACAACCCCTTTGCATAGAGTAATTCAGAGTTCCCCCTATATGAATACAAGtaaccacagagatcatacagtACATCCATATAGAGAGCGtcagagttatcctcagtgaACACGTTTAAGAGAGATACCAGACatggatactatagtattactctATCATAATCAATAGTTAGTCCTCTAAATAGTGTAACAGAGAGATACACTTTGACCACTCAAAGGGAAGGGCTGACTAGCATTGTCCTTTGTGCTTTCCTTGTGATCCTGGACCATCTGAcatgcagctccaggtgacagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207806 True 502 lncRNA 0.44 1 74155844 74156345

Neighbor

gene id symbol gene type direction distance location
LOC110495996 LOC106561183 coding upstream 16342 74126223 ~ 74139502 (+)
LOC110495989 LOC106573469 coding upstream 45020 74069964 ~ 74110824 (+)
LOC110495967 LOC106573468 coding upstream 145285 73999269 ~ 74010559 (+)
LOC110495946 LOC106561177 coding upstream 171107 73883551 ~ 73984737 (+)
idh2 LOC100194640 coding upstream 387313 73756972 ~ 73768531 (+)
LOC110496029 LOC106561185 coding downstream 22138 74178483 ~ 74198686 (+)
LOC110496053 LOC106561188 coding downstream 54118 74210463 ~ 74221530 (+)
LOC110496089 LOC105018423 coding downstream 363431 74519776 ~ 74529599 (+)
LOC110496107 LOC106561202 coding downstream 504014 74660359 ~ 74732682 (+)
LOC110496116 LOC106561204 coding downstream 671922 74828267 ~ 74890826 (+)
G183175 NA non-coding upstream 286 74155246 ~ 74155558 (+)
G183168 NA non-coding upstream 14199 74141347 ~ 74141645 (+)
G183152 NA non-coding upstream 25973 74060896 ~ 74129871 (+)
G183119 LOC106561179 non-coding upstream 121763 74018173 ~ 74034081 (+)
G183117 NA non-coding upstream 139484 74016014 ~ 74016360 (+)
G183177 LOC106561186 non-coding downstream 277 74156622 ~ 74226257 (+)
G183182 NA non-coding downstream 17290 74173635 ~ 74177682 (+)
G183226 frmd4a non-coding downstream 104028 74260373 ~ 74261170 (+)
G183346 NA non-coding downstream 282068 74438413 ~ 74438688 (+)
G183354 NA non-coding downstream 296193 74452538 ~ 74457151 (+)
G182144 NA other upstream 531326 73622536 ~ 73624518 (+)
G182139 LOC106561173 other upstream 545607 73606892 ~ 73610237 (+)
LOC110501876 LOC106561170 other upstream 575769 73456669 ~ 73580075 (+)
G181995 NA other upstream 813567 73341380 ~ 73342277 (+)
LOC110533853 LOC106561194 other upstream 1902117 72250884 ~ 72253809 (+)
G183361 NA other downstream 373304 74529649 ~ 74535026 (+)
LOC110496136 LOC106561223 other downstream 880907 74991655 ~ 75145608 (+)
LOC110496459 LOC106561246 other downstream 2011312 76167573 ~ 76181555 (+)

Expression


Co-expression Network