G183672 (LOC106561185)


Basic Information

Item Value
gene id G183672
gene name LOC106561185
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74196872 ~ 74198670 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU208418
CTTCTGTTTAATTCAATACAAACAACTTCAGGGGATGAGGAGTGAACAACCATTTCAATCTCAATCCATACATTAACAATCAACAAGATAAATTATGAAATCGTCAAGTGCAAATCATTACACAAATAATTTCAACTTTTCTATTCCAAACAACATTCCAACTACTTCAAATAGGCAGAAAAATACTGCTGTGTAAAAAAACAAGGTTGAGAAATACAGAACGGACCCTTCATTAATCCTCCATGACCATGAAATGAACATATTTCAAATATAGTActaaattaaataaaacattttattttatttacagtagCACAGCATAGTAATTCATTTCAAACTGGGGACTAAATTATAGTATTTAAACTATTATTGAATATTACATTAGAGTATTTCAAATATCTGACTGTGATTTATGTACAATAGACAATGTGTTCTTCTAGGATCTCATGGAGTCTGAATCCATACCCTGGGCTTTAGCCTGCAGGCGTTTGTATTTCTTGGCCAGGTCAACGTTGGTGCGTCCCGGCTGGAACGGATAGGCCCAAAGGATGGAGTTCCAGGATGGACCAAACCGCTCTATACCGCGACACAGATAACTCTCCTCCTCACGGCTGaagttcctcctctccctcctctcattgGTATTCACCCTCTTTTCCTTGGTTTTGGAACTGCTCTGAGTCAAAGATGGGTTTCCCATAGAAAGAGTCTTCTGCTGATCATCCATGACACCGTCCTCCCCATCCATGACACCGTCCTCCCCATCCATGACACCGTCCTCCCCATCCATGACACCGTCCTCCCCATCCATGACACCGTCCTCCCt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208418 True 826 lncRNA 0.41 4 74196872 74198670

Neighbor

gene id symbol gene type direction distance location
LOC110496015 LOC106561186 coding downstream 29522 74157073 ~ 74167350 (-)
LOC118941541 NA coding downstream 55996 74119058 ~ 74140876 (-)
LOC110496007 LOC106561184 coding downstream 70663 74122283 ~ 74126209 (-)
LOC110501884 NA coding downstream 84025 74111978 ~ 74112847 (-)
LOC110495986 LOC106561179 coding downstream 129762 74018519 ~ 74067110 (-)
LOC110501892 LOC106561189 coding upstream 42567 74241237 ~ 74433222 (-)
LOC110496063 LOC106561200 coding upstream 253862 74452532 ~ 74473316 (-)
LOC118937295 NA coding upstream 302744 74501414 ~ 74508105 (-)
LOC110496093 LOC106561201 coding upstream 334615 74533285 ~ 74594426 (-)
LOC110496174 LOC106561210 coding upstream 1157901 75356571 ~ 75361242 (-)
G183631 NA non-coding downstream 52086 74144585 ~ 74144786 (-)
G183602 NA non-coding downstream 53819 74141037 ~ 74143053 (-)
G183544 NA non-coding downstream 176776 74019259 ~ 74020096 (-)
LOC110495977 NA non-coding downstream 182491 74010498 ~ 74014413 (-)
G183601 LOC106561188 non-coding upstream 16647 74215317 ~ 74221649 (-)
G183714 NA non-coding upstream 86939 74285609 ~ 74286314 (-)
G183656 NA non-coding upstream 134354 74333024 ~ 74334618 (-)
G183754 NA non-coding upstream 156980 74355650 ~ 74369807 (-)
G183538 NA other downstream 86081 74106883 ~ 74110791 (-)
G183096 NA other downstream 203327 73993078 ~ 73993545 (-)
G182882 NA other downstream 520449 73676212 ~ 73676423 (-)
G182708 NA other downstream 851025 73344950 ~ 73345847 (-)
LOC110495704 nrg4 other downstream 1118493 73076020 ~ 73078379 (-)
G184006 LOC106561202 other upstream 532202 74730872 ~ 74732637 (-)
LOC110496186 LOC106561212 other upstream 1407557 75595366 ~ 75607735 (-)
G186002 NA other upstream 1678689 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 1786489 75985156 ~ 75989573 (-)
adm2b adm2 other upstream 1894500 76093170 ~ 76099909 (-)

Expression


Co-expression Network