Gene
RNA
| Item | Value |
|---|---|
| gene id | G183226 |
| gene name | frmd4a |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 74260373 ~ 74261170 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| frmd4a | Predicted to act upstream of or within transmembrane transport. Predicted to be located in cytoplasm; cytoskeleton; and membrane. Predicted to be integral component of membrane. Predicted to be active in adherens junction and bicellular tight junction. |
| description |
|---|
| FERM domain-containing protein 4A isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU207904 | True | 332 | lncRNA | 0.42 | 2 | 74260373 | 74261170 |
74,258,400
74,258,800
74,259,200
74,259,600
74,260,000
74,260,400
74,260,800
74,261,200
74,261,600
74,262,000
74,262,400
74,262,800
74,263,200
74,263,600
74,264,000
NC_048566.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496053 | LOC106561188 | coding | upstream | 38843 | 74210463 ~ 74221530 (+) |
| LOC110496029 | LOC106561185 | coding | upstream | 61687 | 74178483 ~ 74198686 (+) |
| LOC110495996 | LOC106561183 | coding | upstream | 120871 | 74126223 ~ 74139502 (+) |
| LOC110495989 | LOC106573469 | coding | upstream | 149549 | 74069964 ~ 74110824 (+) |
| LOC110495967 | LOC106573468 | coding | upstream | 249814 | 73999269 ~ 74010559 (+) |
| LOC110496089 | LOC105018423 | coding | downstream | 258606 | 74519776 ~ 74529599 (+) |
| LOC110496107 | LOC106561202 | coding | downstream | 399189 | 74660359 ~ 74732682 (+) |
| LOC110496116 | LOC106561204 | coding | downstream | 567097 | 74828267 ~ 74890826 (+) |
| LOC110496126 | LOC106561207 | coding | downstream | 649297 | 74910467 ~ 74962990 (+) |
| LOC118936821 | LOC106561223 | coding | downstream | 710068 | 74971238 ~ 74988691 (+) |
| G183177 | LOC106561186 | non-coding | upstream | 34116 | 74156622 ~ 74226257 (+) |
| G183182 | NA | non-coding | upstream | 82691 | 74173635 ~ 74177682 (+) |
| G183176 | NA | non-coding | upstream | 104028 | 74155844 ~ 74156345 (+) |
| G183175 | NA | non-coding | upstream | 104815 | 74155246 ~ 74155558 (+) |
| G183168 | NA | non-coding | upstream | 118728 | 74141347 ~ 74141645 (+) |
| G183346 | NA | non-coding | downstream | 177243 | 74438413 ~ 74438688 (+) |
| G183354 | NA | non-coding | downstream | 191368 | 74452538 ~ 74457151 (+) |
| G184023 | NA | non-coding | downstream | 492196 | 74753366 ~ 74753628 (+) |
| G184055 | NA | non-coding | downstream | 520789 | 74781959 ~ 74782190 (+) |
| G182144 | NA | other | upstream | 635855 | 73622536 ~ 73624518 (+) |
| G182139 | LOC106561173 | other | upstream | 650136 | 73606892 ~ 73610237 (+) |
| LOC110501876 | LOC106561170 | other | upstream | 680298 | 73456669 ~ 73580075 (+) |
| G181995 | NA | other | upstream | 918096 | 73341380 ~ 73342277 (+) |
| LOC110533853 | LOC106561194 | other | upstream | 2006646 | 72250884 ~ 72253809 (+) |
| G183361 | NA | other | downstream | 268479 | 74529649 ~ 74535026 (+) |
| LOC110496136 | LOC106561223 | other | downstream | 776082 | 74991655 ~ 75145608 (+) |
| LOC110496459 | LOC106561246 | other | downstream | 1906487 | 76167573 ~ 76181555 (+) |
