G183656


Basic Information

Item Value
gene id G183656
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74333024 ~ 74334618 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU208402
CACCTACACGTCCATCTATTTCTGTCTGTTCTTGTTTACTCTTTCTCTATCGTTCTTCCTCATAATTCTTCCAGCCTCTTCACAAGTTGATTTCACCGTTTTTGAAAACTCAATTAAGTATCAACCAAATAATGGTTGATCTGATCACTCAGGTATTGATTCAGAGAGGATTACTTCCTACTATCATAAGCTGCTCAGTTAATCCACCGCTTCTCTACAAAACTAAGAACATaaaaagagatagggagagagagtgggggagacagaggaagagggagatgaatgaaagaaagaaagaatgaaagagagaaagaaagaaagagaaagaaagaaagaaagaaagagaaagaaagaaaaagagagagagagagagacagtcaatCTCCTAAAGAGGGGGAGAACGGACAAATGTTTTTCTGGGTAACGTTGATCTCCTAGGAGACGCCTCAGTGTCAGGAGGGTTCTCACAGGTCCatggggggagaagggggaggggggtgaatCGCACAGCAGGAGAGGGTATAATTGCTTctgactcacacacacacacacacacacacagagtatgtTAGTGAACAATAACATCTCTGTCAAAGGTATCCAGGCTAGTGGTGAGACAGGAATACTAATCAATGCTCATTACATTTAACCCCTCATCCAATCACTGCCATTAAACATTCTGCCTCATCCAATCAGAAGGTCAGTAGTGGACAGGGGCATCATGGGGCTGTGGGCGGTACTGTGACCTGTCTTCATTAGGCCATGTGTCCTCCATCACCCATTCACAAAAGACATGTATTATATTGAAACAACCAAAAAGCAAGTTGCTGATGAATGTCTTCATCCTGAAACTATTCTGGCACACTGACCTTGAAGGTCGCTGCAGTAGTCTAGTTTTACACTTCTGTTTACCCTGGTTCTATTTTCCTCCTTAGATTCCCAGGGATACCCTCTCTCGCCCTGGGGGTGCTGGCTTTGAAATAAGAGAGGGGCGGGATGGGGACGTTAGGAGAGAATTTGAGAATGGGAAGCAAGGGTGCGAGGGGTGCAGCTGCACGGCATCTTAAACCCTGCTCTCCCTCTTGTGTCTTGCCCTGTTTGGGATGAAAGGGGACCCCCCTTTCCCCACAAAATGCTTTGGATGGAAGGAATGTTTTGGAGAAGAAGACCCCATCctactcttcttctcctccaattgtttcactcctctcctcctcccctcttctgttTTTCACTCTTCGATCAGAATAACAGAGTTGTTATGTCTGGTCCCAAACCAACCCCTGACCCTATCCCAAGACACCTCTCGTAGATCTAAAACAACACATATTCCCAGATAACCTGCTGAGAAAATAAACATTAAATAACGACTCAAATAATGTCTTCTAATAGTCTTCTGTCTCCCAGTACTGTACATCCCAGTCCTACTCTGTGATCCCTCCAGGCCTCCATCTGGCCTGGCTGAGGCTGGCCTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208402 True 1477 lncRNA 0.57 2 74333024 74334618

Neighbor

gene id symbol gene type direction distance location
LOC110496015 LOC106561186 coding downstream 165674 74157073 ~ 74167350 (-)
LOC118941541 NA coding downstream 192148 74119058 ~ 74140876 (-)
LOC110496007 LOC106561184 coding downstream 206815 74122283 ~ 74126209 (-)
LOC110501884 NA coding downstream 220177 74111978 ~ 74112847 (-)
LOC110495986 LOC106561179 coding downstream 265914 74018519 ~ 74067110 (-)
LOC110496063 LOC106561200 coding upstream 117914 74452532 ~ 74473316 (-)
LOC118937295 NA coding upstream 166796 74501414 ~ 74508105 (-)
LOC110496093 LOC106561201 coding upstream 198667 74533285 ~ 74594426 (-)
LOC110496174 LOC106561210 coding upstream 1021953 75356571 ~ 75361242 (-)
LOC110501959 rbm28 coding upstream 1244232 75578850 ~ 75582017 (-)
G183714 NA non-coding downstream 46710 74285609 ~ 74286314 (-)
LOC110501892 LOC106561189 non-coding downstream 81923 74241237 ~ 74433222 (-)
G183601 LOC106561188 non-coding downstream 111375 74215317 ~ 74221649 (-)
G183672 LOC106561185 non-coding downstream 134354 74196872 ~ 74198670 (-)
G183631 NA non-coding downstream 188238 74144585 ~ 74144786 (-)
G183754 NA non-coding upstream 21032 74355650 ~ 74369807 (-)
G183760 NA non-coding upstream 27208 74361826 ~ 74362726 (-)
G183817 NA non-coding upstream 105992 74440610 ~ 74440876 (-)
G183819 NA non-coding upstream 107002 74441620 ~ 74441903 (-)
G183757 NA non-coding upstream 116345 74450963 ~ 74451394 (-)
G183538 NA other downstream 222233 74106883 ~ 74110791 (-)
G183096 NA other downstream 339479 73993078 ~ 73993545 (-)
G182882 NA other downstream 656601 73676212 ~ 73676423 (-)
G182708 NA other downstream 987177 73344950 ~ 73345847 (-)
LOC110495704 nrg4 other downstream 1254645 73076020 ~ 73078379 (-)
G184006 LOC106561202 other upstream 396254 74730872 ~ 74732637 (-)
LOC110496186 LOC106561212 other upstream 1271609 75595366 ~ 75607735 (-)
G186002 NA other upstream 1542741 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 1650541 75985156 ~ 75989573 (-)
adm2b adm2 other upstream 1758552 76093170 ~ 76099909 (-)

Expression


Co-expression Network