G183346


Basic Information

Item Value
gene id G183346
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74438413 ~ 74438688 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU208036
cattcaatgtttttttcagtgagcaactccagtatagatttggccttgtgttttaggttattgtcctgctgaaagatgaattcatctcccagtgtctggtgaaaagcagactgaattaagtttttctctaggattttgcctgtgcttaactccattctgtttcttttttgtgCTGAAAAACTCCCCCTTCCTTAACTATTACAAGCATaccgataacatgatgcagccagcagtggtactcagtaatgtgttgtattgtatttgcctcaaacataa

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208036 True 276 lncRNA 0.38 1 74438413 74438688

Neighbor

gene id symbol gene type direction distance location
LOC110496053 LOC106561188 coding upstream 216883 74210463 ~ 74221530 (+)
LOC110496029 LOC106561185 coding upstream 239727 74178483 ~ 74198686 (+)
LOC110495996 LOC106561183 coding upstream 298911 74126223 ~ 74139502 (+)
LOC110495989 LOC106573469 coding upstream 327589 74069964 ~ 74110824 (+)
LOC110495967 LOC106573468 coding upstream 427854 73999269 ~ 74010559 (+)
LOC110496089 LOC105018423 coding downstream 81088 74519776 ~ 74529599 (+)
LOC110496107 LOC106561202 coding downstream 221671 74660359 ~ 74732682 (+)
LOC110496116 LOC106561204 coding downstream 389579 74828267 ~ 74890826 (+)
LOC110496126 LOC106561207 coding downstream 471779 74910467 ~ 74962990 (+)
LOC118936821 LOC106561223 coding downstream 532550 74971238 ~ 74988691 (+)
G183226 frmd4a non-coding upstream 177243 74260373 ~ 74261170 (+)
G183177 LOC106561186 non-coding upstream 212156 74156622 ~ 74226257 (+)
G183182 NA non-coding upstream 260731 74173635 ~ 74177682 (+)
G183176 NA non-coding upstream 282068 74155844 ~ 74156345 (+)
G183175 NA non-coding upstream 282855 74155246 ~ 74155558 (+)
G183354 NA non-coding downstream 13850 74452538 ~ 74457151 (+)
G184023 NA non-coding downstream 314678 74753366 ~ 74753628 (+)
G184055 NA non-coding downstream 343271 74781959 ~ 74782190 (+)
G184060 NA non-coding downstream 346744 74785432 ~ 74785668 (+)
G182144 NA other upstream 813895 73622536 ~ 73624518 (+)
G182139 LOC106561173 other upstream 828176 73606892 ~ 73610237 (+)
LOC110501876 LOC106561170 other upstream 858338 73456669 ~ 73580075 (+)
G181995 NA other upstream 1096136 73341380 ~ 73342277 (+)
LOC110533853 LOC106561194 other upstream 2184686 72250884 ~ 72253809 (+)
G183361 NA other downstream 90961 74529649 ~ 74535026 (+)
LOC110496136 LOC106561223 other downstream 598564 74991655 ~ 75145608 (+)
LOC110496459 LOC106561246 other downstream 1728969 76167573 ~ 76181555 (+)

Expression


Co-expression Network