G183361


Basic Information

Item Value
gene id G183361
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74529649 ~ 74535026 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU208054
ATTTGTTATGGTTTATTATGATGTCGTCATGTCTTCATTATTGCACGCATCATGAGCTCTATTGCTTTGTGATTGGCCAGTCCAAAGAGGTCAGGGTTCACCTTGACTCCAGATTGTGGAGTAGGGTGAAATTGTCCCTAACCACTGATCTAGGGTCAGATACATTGTCATCCTCTAATGGTTACAGTTAGAATTgaggatctgatcctagatctgtgcttaTTGGAGCAACTTCTACCTCGACTCCGGAATGTTCTGGCCTGTTCCTTTAACATCTGGGAAACACTGGTTAATTCCAGTTTAGAATACGCTGTGAAAGCGAACACATTTGTTAACATTATTAAAGACCCCTTTGGACACACTTGGTACCATTAAAATTGACACTGATAATGGTAAAACACTGACTTAACATCACTGTTCTGTTGTACTGATCTACATTGCTAGTGAATGACCAGTCACTTTCATAGCCTATTATCATATGTACACATTACAATGCCTGTCATCTGTTGGTCAAGCTAAGTAGTAGTCTTTCAAAGGGAGTATGCctcatatctctccctctccatctcttccatcTCCTCAAGGCTCCTGTTGTGACAGCCCCATGTCCTTGGCTTGTATATGAGTCCGGCTCTGTTTCCGTGTGCTTGGCCTGTTGGAGTGGGCTCATAGAACCCTTCTTGGCATGATGTGTTGCAGTGGGCTCAGTATCTGTACAGAGCCTGTCTTAAGCTATCTTGGCTCAGACAAGTACACCAGCAAAGTTTCACAAGATGAGAGAAGGGAGACTGGCGTGGGTGacagagaaagatggggagacaAAGgctgggagtgagatggagaggtgggATGTGGAGAGAAGGGTTGGCTGAGAGAGGGCGTTTTCCACCAAGTCCCGTCATTAGagagccggtgtagtaagattgaatcctactacaccggctctgacgctcgtcggatgtggcagggcttgaaaactattatggactacaaagggaaacccagacgcgagctgcccagtgacgcgagcctaccagacaagctaaatgccttttacgctcgcttcgaggcaagcaacactgaagcatgcacgagagcaccagtgTTTTGGATGAATGTGTGATAAAGCTCgcggtagccaatgtgagcaagacctttattaaacaagtcaacattcacaaagccagatggacgtgtactcaaagcatacgcggaccaactggcaagtgtcttcactgacattttcaacctctaaatgactgagtctgtaatacctacatgtttcaaggagaccaccatagtccctgtgctcaaagaagagaaggtaacctgcctacatgattactgccctgtagcacactacgtcggtagccatgaagtgctttgaaaggctggtcatggctcacatcaacagcatcctcccagacaccctagacccactccaatttgcataccaccccaacagatccactgaTGCCTCAATCGCACTTCACATTGCCCTTTgccacctggataaaaggaacccctatgtgagaatgctgttcattgactacttatcagcgttcaacaccatagtgcccacaaagttcATCAGTAAGGACCGTGgtactaaacatctccctctgcaactggatcctggacttcctgacaggccgcccccaggtggtaagggtaggcaacaacacgtctgccacgctgatcctcaacactggggcccctcgggtgtgtacttagtctcctcctgtactccctgttcacccacgactgcgtggccaaacacgactccaacatcaccattaagtttgctgacgacacagtggtaggcctgatcaccgacaacattTAGCCAGCCTATaggtaggaggtcagagaactggcagtgtggtgccaggacaacaacctctccctcaatgacaAAGGAGCTGATGGAAAAAGGAAAAagcgggctgaacaggcccccattaacatcaacggggctgtcgTGGAGCAGGTCgtgagttccttggtgtccacatcaccaacaatctatcatagtccaaacacaccaagacagtagtgaagagggcacgacaaaaccttttccccctcaggagactgaaaagatttggtatgggtccccaaatcctcaaagttctacagctgcaccatcaatagcatcctgaccggttgaatcactgcctggtatggcaactgcttggcatctgaccataaggcactacagagggtagtgcgtacggcccagtacatcactggggccaagcttcatgTAATCctggacctatataataggcagtgtcagaggaaaacccataatattgtcagagactccagtcacccaagtcactgttttctctgctacagtacggcaagcggtaccggagcgccaagtctacccgctgtatatagcctcattattgttatgttattgtgtttttattatgttttactttagtttatttggtaaatattttcttaactcttcttgaactgcactgttggttaagggcttgtaaataaacatttcacggtaaggtctactgtGCACTTGTagtcagcgcatgtgacaaataaagtttgatttgaacttGTGTGAATCAACATCCCCCACCTCTGTTCTTCATGCTTGACTCCCCCATCCCACTCTATCAGAACAAAAGGAATTGTGAAAGTGGATGTTGCAGTGGTTTGCTATAGTGATGTGCAATGCGGGGAGGGAATAGGAGGGTCTAGTATCTGGTGGGTGCAAGGCTGGGGAGTGAATGCATAAGCCTAGGGACAACAAAGCCTCCCAATCTCTGAGCTGtatgtatgttagtgtgtgtctggGCTGAACAATACTGCTCTGCCTCCTGGGCCATGGGATGCTTTTACATAATCCAGGTCCTCTCGGCctgctgcaacacacacacaaacttcttTAGGTTCCGCTCAATCACAGAaacgctctctccctctttgtgtctgtctttcACTATTGCAAAGACTTTGGGGAAATTTTTGACAGGCTCACTGCGTCAGAGGTGCAACACCGGTTATTACACCCCAGGAAATCCTGTTAGCAGAGAGGGGTGTGGCCTCATTCTCCTGGACTCCACTTCCTTAATGTTTCACACTACGGAAAAGTGGGATGAAGAAAAGAAGACGAGGCGACCAGGATAGGAATCCTTTTGAGATGCATAAAAAATAACTTCCTCCCACCTGATTTTATATACACAATGAGACCGGGGGAGGCTATAGTAACACCGGGAGTAGGATGACTTTAACCACAGACACTGCTCTAAGGTCAGTTTTACATCTTTACCCctactggttaaggttaggattggtgGACTGTAAAcggatcctagatctgtgcctataaGGACAACCTCTACCTGGAGCATAAGCCTAGCAGACACACAGCGTATAGCGGTTAATAGAACATCACATGACTACAGGACACATTGACATGGGAGAACGCACTACCCATTGGTTTAAAGGATGCTGGGAAGATGTGTGTTCAGCTAGACTTGTTTGCAGCAAAGTCTTTTCTACAAACCGTGCTTGTGGAATGATTTCAAAGAATGTTTGTAAATGCTAAATTAAACATCAGTGACATTGCATCAACAATGTTTCTTTAATATTGACAGTTAAGACTTGGAAAGAGTCACTTTTAATGAACTACCTTGAGTTGTCACACTGATGCTAACGTTTGATGCGGAAATACCAGTTAAATAGAAACGTTGTTGTTGTACACACGTCTGTTACTATGGCCATAGTGGCTGTCCCATGGAATTAGAATGAGTAGAAGGAACATTCCAGTTCAAAACCACAGTCCATATTGGGTGGACTGGCTGCCATATTGGGAAAGTTCAATACATATTTGATACTATTCTGCTATAATAAGAGCAAATGTGTGATTCAACATACTATATGAATTAGAGACTACGTCCGTCCGTTCCAGCCATTCTATTCCTATGGGCTAGTCAACACTCACAGAGCTTCATCCACAGTCAGTCCACAGTAGTGGGAATCCTACTGGAGTTACATAATACTGTCAACATTGTGCTGTTCCAACCATCAGTaattatatatacaaatatacagataCAACATACAAATGCATACTGACTGGGTTATTACAATGAGACCTACAAAAAAAGCACAAGAGTAGAAAGTCTGTGGGCTATTGCAGGTGAGGCTGTTGCAGCCACTACTCGTACAGAACATCTGTTTTCAGacacacctaacacacacacacacacacacacacacacacacacactcctatcaCAACTCTAACCTCACAGGCCACATTGTGTGCAcgagtgttgcaaaataaatggacacatacagtatatattattcAATAATTTCGTACGCACCGCTCACGCGCTTGAACGAGCGTCTGCATAGCCAcacgctaaaatagaacttggttctatttgagaCGCTCCACGGACTGCAAGTCCCCTCCTTATTGAATATCAGGAAGATACAGACCCACGTGGATGCTTGACAAACACAGGAGGAGAGATTAATTAAATATAACAAAACTAAGTAGGTTTTCattttttatctgtggattaatcgTCAGAGTAGAGAAACAAGATTTTGTATGACTCCGGGTCAAAATGTTAAAGTTAGAAGACCATATGCATGTCAGGTAAAATATCAACCCAATGTGCATCTCCCAGGACTAACTAGCAGTctcaacagctagctagctaaatgtccatgaatgtttcgACCTGCctccaaattaatatagtttggttttgatatttcaacctgcatgtcacgatcgcgtctggtgtggatgtacaaaatcaacatgcgcgcaATGGCACATGCAGACGCACACACGTGGCCGGTGATGTCAGCATTACCTATCacaaccctaacacacacacacacaacacactcctatcacaaccctaacacacacaacacactccTATCACAACCCTAACACAGTTATAAATAAATTAACACAGCCTTTTAACAAAGCTATCAAAAACAAAGCGTCAAAAAATCCTCCTACAAattttctcttgttcttttgtatgtCTACAACAATGTTGATTccatgatatgtacagcactagaaaATAATTTAATCATAATGCACACTTTCTACAGACATGAAATGGTACTGTGCTAGTCCACGTGGtgggagaggggacaggggggCACAATGTGTGCCTATTGACTAAGTCTCTGGGGGGTGGGGATAGAGAGGTGAGTGGGTGGGGTCACAGAGAGGAAGTGGTGGAGTCAACAATTTCTCTCCCATTACACACAGTCGGTACATACTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208054 True 5298 TUCP 0.52 2 74529649 74535026

Neighbor

gene id symbol gene type direction distance location
LOC110496089 LOC105018423 coding upstream 50 74519776 ~ 74529599 (+)
LOC110496053 LOC106561188 coding upstream 308119 74210463 ~ 74221530 (+)
LOC110496029 LOC106561185 coding upstream 330963 74178483 ~ 74198686 (+)
LOC110495996 LOC106561183 coding upstream 390147 74126223 ~ 74139502 (+)
LOC110495989 LOC106573469 coding upstream 418825 74069964 ~ 74110824 (+)
LOC110496107 LOC106561202 coding downstream 125333 74660359 ~ 74732682 (+)
LOC110496116 LOC106561204 coding downstream 293241 74828267 ~ 74890826 (+)
LOC110496126 LOC106561207 coding downstream 375441 74910467 ~ 74962990 (+)
LOC118936821 LOC106561223 coding downstream 436212 74971238 ~ 74988691 (+)
LOC110496136 LOC106561223 coding downstream 456629 74991655 ~ 75145608 (+)
G183354 NA non-coding upstream 72498 74452538 ~ 74457151 (+)
G183346 NA non-coding upstream 90961 74438413 ~ 74438688 (+)
G183226 frmd4a non-coding upstream 268479 74260373 ~ 74261170 (+)
G183177 LOC106561186 non-coding upstream 303392 74156622 ~ 74226257 (+)
G183182 NA non-coding upstream 351967 74173635 ~ 74177682 (+)
G184023 NA non-coding downstream 218340 74753366 ~ 74753628 (+)
G184055 NA non-coding downstream 246933 74781959 ~ 74782190 (+)
G184060 NA non-coding downstream 250406 74785432 ~ 74785668 (+)
G184072 NA non-coding downstream 257380 74792406 ~ 74792739 (+)
G182144 NA other upstream 905131 73622536 ~ 73624518 (+)
G182139 LOC106561173 other upstream 919412 73606892 ~ 73610237 (+)
LOC110501876 LOC106561170 other upstream 949574 73456669 ~ 73580075 (+)
G181995 NA other upstream 1187372 73341380 ~ 73342277 (+)
LOC110533853 LOC106561194 other upstream 2275922 72250884 ~ 72253809 (+)
LOC110496459 LOC106561246 other downstream 1632631 76167573 ~ 76181555 (+)
G185462 chkb other downstream 1898791 76433817 ~ 76434615 (+)

Expression


Co-expression Network