G183998


Basic Information

Item Value
gene id G183998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74714130 ~ 74749977 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU208766
tccacaaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagtgtgATCATGGGCctgttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctcatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggacatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctgtctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattatacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctccactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatattttcgcaaggcactgtatACTGACAGAGTAGTATACTGACAGATCTGGTGTCGACGTATTCAACTTCTCCAAACCCTATGTGAATGAAGACAATatttaaaggtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208766 True 858 lncRNA 0.49 2 74714130 74749977

Neighbor

gene id symbol gene type direction distance location
LOC110496093 LOC106561201 coding downstream 119704 74533285 ~ 74594426 (-)
LOC118937295 NA coding downstream 206025 74501414 ~ 74508105 (-)
LOC110496063 LOC106561200 coding downstream 240814 74452532 ~ 74473316 (-)
LOC110501892 LOC106561189 coding downstream 280908 74241237 ~ 74433222 (-)
LOC110496015 LOC106561186 coding downstream 546780 74157073 ~ 74167350 (-)
LOC110496174 LOC106561210 coding upstream 606594 75356571 ~ 75361242 (-)
LOC110501959 rbm28 coding upstream 828873 75578850 ~ 75582017 (-)
LOC118936395 rbm28 coding upstream 834580 75584557 ~ 75585136 (-)
LOC110496186 LOC106561212 coding upstream 845389 75595366 ~ 75607735 (-)
LOC110496199 LOC106561215 coding upstream 894364 75644341 ~ 75656164 (-)
G183969 NA non-coding downstream 45663 74666945 ~ 74668467 (-)
G183903 NA non-coding downstream 149476 74563922 ~ 74564654 (-)
G183757 NA non-coding downstream 262736 74450963 ~ 74451394 (-)
G183819 NA non-coding downstream 272227 74441620 ~ 74441903 (-)
G184025 NA non-coding upstream 3750 74753727 ~ 74754012 (-)
G184488 LOC106599044 non-coding upstream 259127 75009104 ~ 75048734 (-)
G184493 NA non-coding upstream 288304 75038281 ~ 75043854 (-)
G184497 NA non-coding upstream 299876 75049853 ~ 75050060 (-)
G184498 NA non-coding upstream 301327 75051304 ~ 75051512 (-)
G183538 NA other downstream 603339 74106883 ~ 74110791 (-)
G183096 NA other downstream 720585 73993078 ~ 73993545 (-)
G182882 NA other downstream 1037707 73676212 ~ 73676423 (-)
G182708 NA other downstream 1368283 73344950 ~ 73345847 (-)
LOC110495704 nrg4 other downstream 1635751 73076020 ~ 73078379 (-)
G186002 NA other upstream 1127382 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 1235182 75985156 ~ 75989573 (-)
adm2b adm2 other upstream 1343193 76093170 ~ 76099909 (-)
G186197 LOC106561241 other upstream 1523547 76273524 ~ 76293392 (-)

Expression


Co-expression Network