G184827


Basic Information

Item Value
gene id G184827
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75448077 ~ 75448482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU209642
GATAACACCTTTGATCACATATGGGATGAAAGGTGATTTACAATATTGTAGCATACTACATTCAAAGTGCAATTTTGAAACATGTACTGTATCTTACATTTCTTGCTATTCGATTAACTGGTTGTTAAAATTACTACATTGAGAAGATATCATTACgttgtgttttggtgattaaaccaatgtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatatttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttctttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209642 True 406 lncRNA 0.34 1 75448077 75448482

Neighbor

gene id symbol gene type direction distance location
LOC110496163 LOC106561209 coding upstream 142786 75278870 ~ 75305291 (+)
LOC110501950 LOC106561208 coding upstream 191238 75142002 ~ 75256839 (+)
LOC110496136 LOC106561223 coding upstream 302476 74991655 ~ 75145608 (+)
LOC118936821 LOC106561223 coding upstream 459386 74971238 ~ 74988691 (+)
LOC110496126 LOC106561207 coding upstream 485087 74910467 ~ 74962990 (+)
LOC118942025 NA coding downstream 104767 75553249 ~ 75554613 (+)
lep LOC106561227 coding downstream 116997 75565479 ~ 75567166 (+)
LOC110496192 LOC106561214 coding downstream 174763 75623245 ~ 75634823 (+)
gcsha LOC106561216 coding downstream 207697 75656179 ~ 75661643 (+)
gtf3c6 gtf3c6 coding downstream 264575 75713057 ~ 75718243 (+)
G184822 NA non-coding upstream 6443 75441017 ~ 75441634 (+)
G184808 NA non-coding upstream 22198 75425673 ~ 75425879 (+)
G184770 NA non-coding upstream 51346 75396369 ~ 75396731 (+)
G184768 NA non-coding upstream 52194 75395307 ~ 75395883 (+)
G184742 NA non-coding upstream 68613 75379223 ~ 75379464 (+)
G184834 NA non-coding downstream 16267 75464749 ~ 75464967 (+)
G184836 NA non-coding downstream 17696 75466178 ~ 75466594 (+)
G184841 NA non-coding downstream 22676 75471158 ~ 75471444 (+)
G184850 NA non-coding downstream 37238 75485720 ~ 75485940 (+)
G184884 NA non-coding downstream 82172 75530654 ~ 75530875 (+)
LOC110496116 LOC106561204 other upstream 561577 74828267 ~ 74890826 (+)
LOC110496107 LOC106561202 other upstream 733963 74660359 ~ 74732682 (+)
G183361 NA other upstream 913051 74529649 ~ 74535026 (+)
G182144 NA other upstream 1823559 73622536 ~ 73624518 (+)
LOC110496459 LOC106561246 other downstream 719175 76167573 ~ 76181555 (+)
G185462 chkb other downstream 985335 76433817 ~ 76434615 (+)
G185549 LOC106561235 other downstream 1085896 76534378 ~ 76606975 (+)
G185718 NA other downstream 1381931 76830413 ~ 76832500 (+)
LOC110502025 LOC106573403 other downstream 1699171 76863449 ~ 77160850 (+)

Expression


Co-expression Network