G185039


Basic Information

Item Value
gene id G185039
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75466178 ~ 75466708 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU209885
gatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgtagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtattctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcgaacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttgacggacctctgagactatcacagtgcaggtgcatttatacggagacttggttacacacaggtggattgtatttatcatcattagtcatttaggccaacattggatcattcagagatcctcactgaacttctagagag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209885 True 531 lncRNA 0.44 1 75466178 75466708

Neighbor

gene id symbol gene type direction distance location
LOC110496174 LOC106561210 coding downstream 104936 75356571 ~ 75361242 (-)
LOC110496093 LOC106561201 coding downstream 871752 74533285 ~ 74594426 (-)
LOC118937295 NA coding downstream 958073 74501414 ~ 74508105 (-)
LOC110496063 LOC106561200 coding downstream 992862 74452532 ~ 74473316 (-)
LOC110501892 LOC106561189 coding downstream 1032956 74241237 ~ 74433222 (-)
LOC110501959 rbm28 coding upstream 112142 75578850 ~ 75582017 (-)
LOC118936395 rbm28 coding upstream 117849 75584557 ~ 75585136 (-)
LOC110496186 LOC106561212 coding upstream 128658 75595366 ~ 75607735 (-)
LOC110496199 LOC106561215 coding upstream 177633 75644341 ~ 75656164 (-)
LOC118942024 NA coding upstream 195052 75661760 ~ 75663665 (-)
G185038 NA non-coding downstream 1335 75464619 ~ 75464843 (-)
G185034 NA non-coding downstream 4318 75456321 ~ 75461860 (-)
G185033 NA non-coding downstream 4654 75455864 ~ 75461524 (-)
G185023 NA non-coding downstream 17607 75448252 ~ 75448571 (-)
G185021 NA non-coding downstream 22551 75443385 ~ 75443627 (-)
G185051 NA non-coding upstream 18607 75485315 ~ 75485605 (-)
G185052 NA non-coding upstream 19154 75485862 ~ 75486126 (-)
G185055 NA non-coding upstream 21946 75488654 ~ 75488870 (-)
G185062 LOC100136012 non-coding upstream 30646 75497354 ~ 75497598 (-)
G185070 NA non-coding upstream 44391 75511099 ~ 75511396 (-)
G184006 LOC106561202 other downstream 733541 74730872 ~ 74732637 (-)
G183538 NA other downstream 1355387 74106883 ~ 74110791 (-)
G183096 NA other downstream 1472633 73993078 ~ 73993545 (-)
G182882 NA other downstream 1789755 73676212 ~ 73676423 (-)
G182708 NA other downstream 2120331 73344950 ~ 73345847 (-)
G186002 NA other upstream 410651 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 518451 75985156 ~ 75989573 (-)
adm2b adm2 other upstream 626462 76093170 ~ 76099909 (-)
G186197 LOC106561241 other upstream 806816 76273524 ~ 76293392 (-)

Expression


Co-expression Network