G185062 (LOC100136012)



Basic Information


Item Value
gene id G185062
gene name LOC100136012
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75497354 ~ 75497598 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU209908
cctggacatgcgctggctagagcagggggaccttgtgtgcgctgcaggattttaatccatgacggcgtagtgtgttactaatggttttctttgagactgtggtcccagctctcttcaggtcattgaccaggtcctgccgtgtatttctgggctgatccctcaccttcctcatgatcattgatgccccacagggtgagatcttgcatggagccctagaccgagggtgattgaccgtcatcttgaac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU209908 True 245 lncRNA 0.53 1 75497354 75497598

Neighbor


gene id symbol gene type direction distance location
LOC110496174 LOC106561210 coding downstream 136112 75356571 ~ 75361242 (-)
LOC110496093 LOC106561201 coding downstream 902928 74533285 ~ 74594426 (-)
LOC118937295 NA coding downstream 989249 74501414 ~ 74508105 (-)
LOC110496063 LOC106561200 coding downstream 1024038 74452532 ~ 74473316 (-)
LOC110501892 LOC106561189 coding downstream 1064132 74241237 ~ 74433222 (-)
LOC110501959 rbm28 coding upstream 81252 75578850 ~ 75582017 (-)
LOC118936395 rbm28 coding upstream 86959 75584557 ~ 75585136 (-)
LOC110496186 LOC106561212 coding upstream 97768 75595366 ~ 75607735 (-)
LOC110496199 LOC106561215 coding upstream 146743 75644341 ~ 75656164 (-)
LOC118942024 NA coding upstream 164162 75661760 ~ 75663665 (-)
G185055 NA non-coding downstream 8484 75488654 ~ 75488870 (-)
G185052 NA non-coding downstream 11228 75485862 ~ 75486126 (-)
G185051 NA non-coding downstream 11749 75485315 ~ 75485605 (-)
G185039 NA non-coding downstream 30646 75466178 ~ 75466708 (-)
G185038 NA non-coding downstream 32511 75464619 ~ 75464843 (-)
G185070 NA non-coding upstream 13501 75511099 ~ 75511396 (-)
G185082 NA non-coding upstream 33006 75530604 ~ 75530914 (-)
G185089 NA non-coding upstream 40716 75538314 ~ 75538548 (-)
G185113 lep non-coding upstream 68547 75566145 ~ 75568183 (-)
G185091 NA non-coding upstream 138733 75636331 ~ 75731310 (-)
G184006 LOC106561202 other downstream 764717 74730872 ~ 74732637 (-)
G183538 NA other downstream 1386563 74106883 ~ 74110791 (-)
G183096 NA other downstream 1503809 73993078 ~ 73993545 (-)
G182882 NA other downstream 1820931 73676212 ~ 73676423 (-)
G182708 NA other downstream 2151507 73344950 ~ 73345847 (-)
G186002 NA other upstream 379761 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 487561 75985156 ~ 75989573 (-)
adm2b adm2 other upstream 595572 76093170 ~ 76099909 (-)
G186197 LOC106561241 other upstream 775926 76273524 ~ 76293392 (-)

Expression



Co-expression Network