G185113 (lep)


Basic Information

Item Value
gene id G185113
gene name lep
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75566145 ~ 75568183 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU209983
TTTGCATATCATCCAAGATTAAATAGTTACATAAAATTTACCAAAAATATATTACAGTATAAATAATTTTGTTTTACAAGGTGAGCTGACTCAgcacacattctcatttacagcaacaacctggggaataattataggggagaggaatgagacaattagaagctggggatgattagatgGCATATTAGacagccagattgggaatttagccaggaccccAGGGTTAAGACCCCTACTCTTACAGTAAGTGCTATGGGATCTATTACTGACCACAGatagtcaggacacctgtttaacatcccatccaataGATGGCACCCTACACATGACAATGTCCCCTATCACTGCCCTGGGATCTTTTTTTCAgatcagaggaaagagtgcctcctactggccctccaacaccacttccagcagcatctggtctctcaTCTAGCAACCCACCagtaccaaccctgcttagcttcattGGAAAGCCAACAGTGGGATGTATGATGAGGCTGTCTTAGCTTTCAGGAAAACCTCTCTGTGAGTATGATGACATCACTACACACATGCAGTCTAGTCCTCCCTGGAGCAGGCAGCATTactcaacgtgtgtgtgtgtgtacattctgCAATACAGCTGATTCAATGCTTAGTAAACACTTCCCCCTGTGCCACTGACTGAAGGGTGTATAATGCTACAAAACAAAGCTGCTTATTTTTTATCTTCTTGAtagaaataaatataaataaagatACAGTCCTTGTctaaataatacaatataaaatgTCTTAACTTAGCAGGAGATGGTGACAGTGGGATGACCTACATTTGGGAGAATCTTCAGACACCATGACCCCACTGTCCAGTCTTGCTTCAACTCATTCTAGGATTTCAGCAGATCACGAGTTGATCATAGTTCAGTTACTCAGTGACAGTCACTGTCAGTAACAGTTGTTCAGCATGGCACAAACTGATCTGAGTTCAGTTGCTCAGTGATTGTCAACATTAGTAACAGTAATTCAGCTGATCCAGGTTCAGTAGTAACCGACCAAGGTAGCCCTTGAGTCTGTTTAGCGCAACTGGACCCACACTCAGACCATACTTCCTGGTAGTGTCTTTCAGAGCCTCTGACagccctccctctcctgtctgtttctgttgGCGGGCTGGGCAGCGTGATGTCATCCAGTTCTCCAGCAGACCCCTCATAGTGGAGGTGTCTTCCACCAGCTGTTTGAGGTCTGCCCAGTCTAGGACGAGCAGTAGGTCCTGGTAGAATCCCATGGTCTCCACTATGGAAGGCAGGCTTTCTATATGCTGATCTACTGCAGCCGCAGGGAGAAATGGGTCCATGCCCTCGATCAGGTTAGGAGATATATCCAgctggaggaagagagaaatgtGATTAATATACGATTAATGTAGGTTATACATGCTGTTTTTTTGTTTAATTCATCAACAAGCTAAAGATTGATAGATTGGTTGATTACCTTTTTGATCCTAATCACCATGGTTTGAGCAAGGTCTTTGACCTTGGTCCTCACTACATGCAATGAGAGTGAAGCTCCCGCCCCCACGCTGAACAGAGCCAACAGAGAGGACAACAGGAGGGCCATGGAGCAGTCCATATCTGTAGTCTGGAGGAATGGGTGTATGTGCCTGAACGTGTGTACCTGTGTCAATATGTGTGCAGGTTTGTGTCTAGAACCTGGTGGTTTCTCTGTGTTTATATAAAGAACAGCACGGGC

Function

symbol description
lep Enables leptin receptor binding activity. Involved in several processes, including positive regulation of signal transduction; regulation of cytokine production; and regulation of lymphocyte proliferation. Predicted to be located in cytosol. Predicted to be active in extracellular space. Implicated in several diseases, including alcohol dependence; congenital leptin deficiency; liver disease (multiple); lung disease (multiple); and type 2 diabetes mellitus. Biomarker of several diseases, including alcohol dependence; cystic fibrosis; fatty liver disease (multiple); liver disease (multiple); and lung disease (multiple).

NR:

description
leptin isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209983 True 1737 lncRNA 0.45 2 75566145 75568183

Neighbor

gene id symbol gene type direction distance location
LOC110496174 LOC106561210 coding downstream 204903 75356571 ~ 75361242 (-)
LOC110496093 LOC106561201 coding downstream 971719 74533285 ~ 74594426 (-)
LOC118937295 NA coding downstream 1058040 74501414 ~ 74508105 (-)
LOC110496063 LOC106561200 coding downstream 1092829 74452532 ~ 74473316 (-)
LOC110501892 LOC106561189 coding downstream 1132923 74241237 ~ 74433222 (-)
LOC110501959 rbm28 coding upstream 10667 75578850 ~ 75582017 (-)
LOC118936395 rbm28 coding upstream 16374 75584557 ~ 75585136 (-)
LOC110496186 LOC106561212 coding upstream 27183 75595366 ~ 75607735 (-)
LOC110496199 LOC106561215 coding upstream 76158 75644341 ~ 75656164 (-)
LOC118942024 NA coding upstream 93577 75661760 ~ 75663665 (-)
G185089 NA non-coding downstream 27597 75538314 ~ 75538548 (-)
G185082 NA non-coding downstream 35231 75530604 ~ 75530914 (-)
G185070 NA non-coding downstream 54749 75511099 ~ 75511396 (-)
G185062 LOC100136012 non-coding downstream 68547 75497354 ~ 75497598 (-)
G185055 NA non-coding downstream 77275 75488654 ~ 75488870 (-)
G185091 NA non-coding upstream 68148 75636331 ~ 75731310 (-)
G185092 NA non-coding upstream 153661 75721844 ~ 75725317 (-)
G185951 NA non-coding upstream 228061 75796244 ~ 75796452 (-)
G185952 NA non-coding upstream 228394 75796577 ~ 75798109 (-)
G185985 NA non-coding upstream 274418 75842601 ~ 75843476 (-)
G184006 LOC106561202 other downstream 833508 74730872 ~ 74732637 (-)
G183538 NA other downstream 1455354 74106883 ~ 74110791 (-)
G183096 NA other downstream 1572600 73993078 ~ 73993545 (-)
G182882 NA other downstream 1889722 73676212 ~ 73676423 (-)
G182708 NA other downstream 2220298 73344950 ~ 73345847 (-)
G186002 NA other upstream 309176 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 416976 75985156 ~ 75989573 (-)
adm2b adm2 other upstream 524987 76093170 ~ 76099909 (-)
G186197 LOC106561241 other upstream 705341 76273524 ~ 76293392 (-)

Expression


Co-expression Network