G184936


Basic Information

Item Value
gene id G184936
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75606170 ~ 75606650 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU209765
GAATATTGCGCCATatcaaagaaaataaaaaaacaatgtgcaaaactgcagcatcccacttaaaacattaaacaTCCCTCTTTTCTCTAttctttattgccatgttataaccagcagcacacaggAATACTGACCATATTTTGCTTTTATGAGGgatttgcattcagaaatgcaagctgcctcactttcgaggggctgatgcggtttcttctctcagtaattGTTTTTCCCGTTTTTGAGAAGACCCCCTCAGAGGGAACGGATGTGGCCACAATGCAGAGTCTCCCCgtcatgactttagtaagccgtgggtagacagaggccttgttcttccaccagctcagaggatctgcagatcttTGGAGTGGCTCCTCCAAATAGGATCGGacctccattatggcatctgctAAAGGGATCCCTTCAtgctgcatccccagttgctctctcGTCAAACAGCATCCATTCGTTATTTGAATTAGTT

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209765 True 481 lncRNA 0.44 1 75606170 75606650

Neighbor

gene id symbol gene type direction distance location
lep LOC106561227 coding upstream 39004 75565479 ~ 75567166 (+)
LOC118942025 NA coding upstream 52281 75553249 ~ 75554613 (+)
LOC110496163 LOC106561209 coding upstream 300879 75278870 ~ 75305291 (+)
LOC110501950 LOC106561208 coding upstream 349331 75142002 ~ 75256839 (+)
LOC110496136 LOC106561223 coding upstream 460569 74991655 ~ 75145608 (+)
LOC110496192 LOC106561214 coding downstream 16595 75623245 ~ 75634823 (+)
gcsha LOC106561216 coding downstream 49529 75656179 ~ 75661643 (+)
gtf3c6 gtf3c6 coding downstream 106407 75713057 ~ 75718243 (+)
LOC110496239 LOC106561219 coding downstream 113153 75719803 ~ 75722571 (+)
LOC110496246 LOC106561218 coding downstream 119411 75726061 ~ 75730218 (+)
G184927 LOC106561212 non-coding upstream 10122 75592282 ~ 75596048 (+)
G184914 NA non-coding upstream 30568 75575371 ~ 75575602 (+)
G184896 NA non-coding upstream 53442 75552379 ~ 75552728 (+)
G184893 NA non-coding upstream 57608 75548284 ~ 75548562 (+)
G184938 NA non-coding downstream 2866 75609516 ~ 75609727 (+)
G184959 NA non-coding downstream 51194 75657844 ~ 75659056 (+)
G185186 NA non-coding downstream 167116 75773766 ~ 75781152 (+)
otogl LOC106573511 non-coding downstream 190598 75730818 ~ 75797742 (+)
LOC110496116 LOC106561204 other upstream 719670 74828267 ~ 74890826 (+)
LOC110496107 LOC106561202 other upstream 892056 74660359 ~ 74732682 (+)
G183361 NA other upstream 1071144 74529649 ~ 74535026 (+)
G182144 NA other upstream 1981652 73622536 ~ 73624518 (+)
LOC110496459 LOC106561246 other downstream 561007 76167573 ~ 76181555 (+)
G185462 chkb other downstream 827167 76433817 ~ 76434615 (+)
G185549 LOC106561235 other downstream 927728 76534378 ~ 76606975 (+)
G185718 NA other downstream 1223763 76830413 ~ 76832500 (+)
LOC110502025 LOC106573403 other downstream 1541003 76863449 ~ 77160850 (+)

Expression


Co-expression Network