G185091


Basic Information

Item Value
gene id G185091
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75636331 ~ 75731310 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU209950
ATTTACACAAcactttgaagatgcaaaatattttttattgtgaaacaaacagaacttgagcatgcataactattcatcccccccaaagtcaatactttgtagaactaccttttgcagcaattacagctgcaagtctcctggggtatgtctctacaagcttggcacatctggccactgggatttttgcccattcttcgaGGCgtaactgctccagctccttcaagttggatgggttctgctggtgtacagcaatctttaagtcataccacatattctcaattggattgaggtctgggctttgactaggccattccaagacatgtaaatgtttccccttaaaccattcGAGTGTTACTTTagtagtatgcttagggtcattgtcctgctggaaggtgaacctctgtcccagtctcaaatctctggaagactgaaacaggtttccctcaagaatttcccagtatttagtgccatccatcattccttcaattctgaccagtttcccagtccctgccgatgaaaaacatccccacagcatgatgctgccaccaccatgcttcactgtggggatggtgttcttagggagatgagaggtgttgagtttgcgccagaaatagcgttttccttgatggccaaaaagctcaattttagtctcatctgtccagagtaccttcttccatatgtttggggagtctcccacataccttttggcgaacaccaaacgtgtttgctattttttctttaagcaatggcttttttctggctactcttctgtaaagcccagctctgtggagttatctttgtctctttgtctctttgttgcctctgattaatgccctccttgcctggtctgtatTTTTTGGTGGGCGGCACTCTCaaggcaggtttgttgtggtgccatattctttccattttttttataacccaaccctgatccaCAACTTtgttctccacaactttgtctccACAACTTtggcacgcaccacttttctgtattttttttgttgttgaatttttttaaacaagtcattttttccattTCTATTCACCTATttgaactattttgtgtatgtccattacattaaatccaaataaaTATCCATTTTAATTGCAGGTTGTGatgtaacaaaataggaaaaacgtcaagggggatgaatacttttgcaaggcactgtatatgcctaCAGGAGGGTGCTGTTGAGGATGGATGGCATATTAGTGAGTTGTCTAGCTACTCATTTTAAGTATATTTGCCATTGCTAAAGTGACTTGAATTGTCCTAATGGTCCTCTCTTTTTAGCTATGTTTTAATTTGTACAGGTAACCACAACTGATTGTACTCAATCTCTGACACTAGGCACCTCTATTTCAGTCTcggaaaattatatattttttcgtAGCTTTTTTTGTTTGCCCGTTGTAGGTTATATTTCATGGTATGGCTTAGTGTATTCCCCACAGGCTTTAAAGAGATTATTATGACCGTATGTGAACCACCGGCTTGATTGGGTTCTAGTagcaacattaaaaaaaaatgtttacttttAATTTGGaataaagtagagactcagagctactaAAGGGTATATCAGCCATACACTGcaattgaggaacaatgggaaagtaattctgctttgaaagtttataaacttgtaaccccacttttgaggaAAGGGCCCTTGGATGTTTTGGTACATGGTagacctactggagagctctttgtctacacctattcacaccctcttaaccctcttaagccttagccccacccatctctttacaATTTCCACTTTATCTACTctttggcctatatcctaatctgactttgaaagtgtccagataaaaataatgtataattagatgatgcttacccaGACACTTGTCTacattgatgggtcatgtgaaagaaatgctacaACCACCCCCAACCACATCTAATGATGTgtatgggtcactattgtctataCATGTACACATGTTCCTGAAATACAATAAATGGCCATAATCAAcctcagacacacctggctaacttaaTGGGTCAAGTAATCATTCTCTTGCAAAGTGGAGTCTTGTTTAGACGTGTAGCTACCTGGCTAAACAATGAACTATATTCCCAACCCATAGCTACAGTACAAATGGATTGTCATAGCTTGCCACTATGCATAAAATGCTAGAGTATGAatatgcaggtagctaaagcGAACAAACTAGGttcaaagctagctagctaacattgggctacaactagcaatgcaaatggatttctgagaTCCTAATAATATTAccacacagatcatacacgtaatgttagctagtgatccagctaactaacagtacactttaacttgcaatgaaaatgactttctgacaaaattagaaatgtataatatctgaaaatgtagctagactcttacccgtgTACATGGATAAACACTTCACGGCAGCATGTCTTTTCCATTTGCTTTGTAGctaggcacatgaaagttcacatattccagaaggcatttctgccaaaaaaacacattttgataaaaacattttttgttaaaATGCCTCCCTTGTGAATTAGTGACGTGCGACATACGCTTAGCTTATTAAACATTCCAAATTCCCTTCGTAAGTAGTATTTTATAATCATTTCTACCGCAATATTGATAAATAAGGTCCCAGGACTTGGACTTGGActtgacttggactcgagtcacgATTTTCATGACTTATGACTTGACTCGGACTCGACCAGTagtgattttgttgtcagaaAATCTCTTTGTTGCATGATTTAACAAAGTAGCTACAACAGCAAATATTAGAGTGCTGTATTATGTAGATATCTTTACAATGTGCAACAATGTAACAGAATTTAGATTTTTAAATGGTTGGACCACAGCTTTTAGCACTACCAAGGAACTCTTGACTCAAGTATAAAGGACTTTAACACTAGGGACTTTGGACTCGACTCTGACTCGAGGTTTAGTTTGTTGACTACATCACCGGTCTACACTGTGGATATTGCTGTACTCAGGCTCTCAGTGGATTCTCATCAGTTTGGAATCAAACAAAACAGATAGAAAGTAGATACCCAAATTCTGTTTTGTCTTTGTGTAAAGTTTTGTGACGTGTTATCTGATGAGAGCATAATTGTACAGTGACTTTGGCCTAGTCTTTAGTTCATCAGTAGACTGTTAATAATATGATGTATTtgtaaatatatactgtagtacttgAGTGGATTTGAGAAAAGGAATATATATGTAGGCCACAATATAAGTACCTAGGGCTGGTTTCCTGAACACAGACTAAGCCTAGCATGCTCAATGTAGAGTGTGTGTCCTGGAAACCACCCCTGGATGTCTTTCTATAATTATCTTGTTAACCAGGCATGTACTGCTactgcagatgtaggatcttaatttgatcacaatTTTGTTGCTCAGAATGTTCttacacagcaggaaatgcaagcTTGTTGTGTATTTGAGTTTGAAAAagacttctaaagtttgtaatttccagtttaaaatgtcagacttgatttgccccaaCAAAAAATGTATCGACCCCTTCAAAAATGTAAAtttgaattataatccacatcagtagaggctgctgaggggaggaatggcatcaaacacatggaaaccatgtttgatgtatttgataccattccacacctactctgctccagccattaccacaccAACCTCCAGTGATCCACTTAATAATTCAACATTTCTGTtgatgcaggattattttcctgctatagcaaactggctcaaatgaagattctacatctgtaccTGGTGGCAGTGAGTGAAGAAATGTTGTTTATCCATCTTCCATTTCATAAATCTTATTCCTGTAGAAGACCTGCAGCTAGTTTATAACAGTAGACCACTATCAGTTGTTAGTCAACCACCAGCAACGACAGAACCACTCTGTCTGTTGTGTTAATCTTTGTGTGAAGTGAACCTTGGGTGCTGAAAGTTGCACAAAAGCTGATCAGATGTTTTATTAGTGTTATTTATTTTGTTCTATCCTGGCGATCTCAATCTCTGGCTTTTAATTCACTCAAGCTGTACCATGCTGTTGCATAAACCAGAATAAAGAATTGAACTAATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU209950 True 4119 lncRNA 0.39 3 75636331 75731310

Neighbor

gene id symbol gene type direction distance location
LOC110496186 LOC106561212 coding downstream 28596 75595366 ~ 75607735 (-)
LOC118936395 rbm28 coding downstream 51195 75584557 ~ 75585136 (-)
LOC110501959 rbm28 coding downstream 54314 75578850 ~ 75582017 (-)
LOC110496174 LOC106561210 coding downstream 275089 75356571 ~ 75361242 (-)
LOC110496093 LOC106561201 coding downstream 1041905 74533285 ~ 74594426 (-)
LOC110496262 LOC106561255 coding upstream 115231 75846541 ~ 75885181 (-)
ddx11 ddx11 coding upstream 169897 75901207 ~ 75915303 (-)
tnni1c LOC106561253 coding upstream 253846 75985156 ~ 75989573 (-)
miox miox coding upstream 335490 76066800 ~ 76069833 (-)
adm2b adm2 coding upstream 363012 76093170 ~ 76099909 (-)
G185113 lep non-coding downstream 68148 75566145 ~ 75568183 (-)
G185089 NA non-coding downstream 97783 75538314 ~ 75538548 (-)
G185082 NA non-coding downstream 105417 75530604 ~ 75530914 (-)
G185070 NA non-coding downstream 124935 75511099 ~ 75511396 (-)
G185062 LOC100136012 non-coding downstream 138733 75497354 ~ 75497598 (-)
G185951 NA non-coding upstream 64934 75796244 ~ 75796452 (-)
G185952 NA non-coding upstream 65267 75796577 ~ 75798109 (-)
G185985 NA non-coding upstream 111291 75842601 ~ 75843476 (-)
G185940 NA non-coding upstream 112465 75843775 ~ 75845314 (-)
G185992 NA non-coding upstream 125153 75856463 ~ 75857678 (-)
G184006 LOC106561202 other downstream 903694 74730872 ~ 74732637 (-)
G183538 NA other downstream 1525540 74106883 ~ 74110791 (-)
G183096 NA other downstream 1642786 73993078 ~ 73993545 (-)
G182882 NA other downstream 1959908 73676212 ~ 73676423 (-)
G186002 NA other upstream 146049 75877359 ~ 75878060 (-)
G186197 LOC106561241 other upstream 542214 76273524 ~ 76293392 (-)
si:dkey-234i14.6 LOC106561240 other upstream 590497 76321757 ~ 76341834 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G130613 NA non-coding NC_053124.1 CM020921.1 1584094 ~ 1584606 (+)