G185952



Basic Information


Item Value
gene id G185952
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75796577 ~ 75798109 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU210948
CAGCAGATCAATGCTGTGTGTGAATAGCGAGTGGTTGAATGTGAGAAATAAGTATCATTCACTGATCAATCACTAATCAATCAATGACTAATCAATGTGGATTCATGCCTCTCCAATAGTTCATATCTTCCTTCTGGAGGTCACTGGTGTTTTACCTTGGATGAAGTGTCATTAACACTGTGTATTTACATGGTAATTATATATACAGATTGTTAGACTCCCACACGCACCATTATTACACACCACCAGGATAGAGCAACACAAACACACGTCAGCACTGAACAAGCTGTGTCAGCAGGGGagcgtgtgtgtggaggaggatgatgagTTTTTCATTCACGCAACAAAACACCCACCAATCAGTTAGTCATtgttaaatgttttattgttttattctGAGAGGTTCTGCATGACTAGAGACTCTAGTCTATCTGATGGCATCAGCACATACTGATTACTGGCACAATGCTTCACAttaaacaacacaacaaatacaGCGTTCTCTTGAAATACAGATCATCTACCATCAGATGCTCAGGTGGATTATCACCTTACTAAATAATTGATTGagttaaatacaaatatttttggaTAAAAGCTTTACActtgtaaaaaaaataactattttgtAAGATAAATTTGATTGGCATATAAAACATGTCAGTCATCAAGAGAGCACTAGATCCATACTAAAGCAGCAGTGGTCTTGTCAGCTCAGACCAACTGATCTAAACGTGATAAAGTCTGAGAGGACTAGCTAGTGTTACACACGAGGAGGAGCAGGCTACAGCAGTACAGATAGGACTAGTGTTATCATAGTACAGCAGGAACAGGTTACAGCCCTGCACATCTGACCACTACATATCTGTAACGACAGGGTCACTATAACAGGTCAGCATACAGCCCTCCACAACACACTGAAGGAAGACTAAAGAACTCGCCTACCTGGACGCTTGACCTGTctactctgacctctgacctctaacctctgttcCATCTTCCATCCCTCCTATTGAACGCCATACTGGAGCTCACACTGACTAGCTTCGCTCTCTCTTTAGTTCCATTGGCAGGAGCAGTCGACAGGCTCCTGGAAGCTGTAGACCACCAGGGTAGCGTTGTGTGAGCAGTACAGGGTGACGGAGCGGGTTTGTAGTCCACTCTCCCTGCAGCACTTGCAGAAGCGGGCGTGGCTGTTGATGTTGAAGTTAAAGATGGTGGCAGACGGACACTTCCCATCACATGAAAACACtgtcacctgagagagagaaaagagagaaagggggagagagagggggagattttATTCTCTATCAGTGTTAACTTTTTAAAACTGTCTTattgacactctctctctcaccggtGCGTTGCTCCTGCAGTCGTCTTTTCTGATGGTGGTTCGGATTGCCACACGCTTACAAGTCTTGCCGTCCTCCTTAcctaaacacacacgcacacagaggaaACGCTGAgatgcacacgcatgcacacacacacacacacacagctttcatCCTCAGCCATAGATTCCTG

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU210948 True 1533 lncRNA 0.44 1 75796577 75798109

Neighbor


gene id symbol gene type direction distance location
LOC110501970 LOC106561217 coding downstream 94771 75688498 ~ 75701806 (-)
LOC118942024 NA coding downstream 132912 75661760 ~ 75663665 (-)
LOC110496199 LOC106561215 coding downstream 140413 75644341 ~ 75656164 (-)
LOC110496186 LOC106561212 coding downstream 188842 75595366 ~ 75607735 (-)
LOC118936395 rbm28 coding downstream 211441 75584557 ~ 75585136 (-)
LOC110496262 LOC106561255 coding upstream 48432 75846541 ~ 75885181 (-)
ddx11 ddx11 coding upstream 103098 75901207 ~ 75915303 (-)
tnni1c LOC106561253 coding upstream 187047 75985156 ~ 75989573 (-)
miox miox coding upstream 268691 76066800 ~ 76069833 (-)
adm2b adm2 coding upstream 296213 76093170 ~ 76099909 (-)
G185951 NA non-coding downstream 125 75796244 ~ 75796452 (-)
G185091 NA non-coding downstream 65267 75636331 ~ 75731310 (-)
G185092 NA non-coding downstream 71260 75721844 ~ 75725317 (-)
G185113 lep non-coding downstream 228394 75566145 ~ 75568183 (-)
G185089 NA non-coding downstream 258029 75538314 ~ 75538548 (-)
G185985 NA non-coding upstream 44492 75842601 ~ 75843476 (-)
G185940 NA non-coding upstream 45666 75843775 ~ 75845314 (-)
G185992 NA non-coding upstream 58354 75856463 ~ 75857678 (-)
G185939 fkbp4 non-coding upstream 72952 75871061 ~ 75935987 (-)
G186001 NA non-coding upstream 78086 75876195 ~ 75877130 (-)
G184006 LOC106561202 other downstream 1063940 74730872 ~ 74732637 (-)
G183538 NA other downstream 1685786 74106883 ~ 74110791 (-)
G183096 NA other downstream 1803032 73993078 ~ 73993545 (-)
G182882 NA other downstream 2120154 73676212 ~ 73676423 (-)
G186002 NA other upstream 79250 75877359 ~ 75878060 (-)
G186197 LOC106561241 other upstream 475415 76273524 ~ 76293392 (-)
si:dkey-234i14.6 LOC106561240 other upstream 523698 76321757 ~ 76341834 (-)

Expression


G185952 Expression in all Baseline Samples

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G185952 Expression in each Bioproject

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G185952 Expression in each Sample
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Co-expression Network