Gene
RNA
| Item | Value |
|---|---|
| gene id | G185204 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 75842626 ~ 75843401 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU210089 | False | 574 | lncRNA | 0.35 | 1 | 75842626 | 75843199 |
| TU210088 | True | 556 | lncRNA | 0.39 | 1 | 75842846 | 75843401 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ptprq | LOC106561260 | coding | upstream | 80 | 75798506 ~ 75842546 (+) |
| LOC118942030 | LOC106561226 | coding | upstream | 11154 | 75829380 ~ 75831472 (+) |
| otogl | LOC106573511 | coding | upstream | 44884 | 75730818 ~ 75797742 (+) |
| LOC118942028 | LOC106561225 | coding | upstream | 105131 | 75736814 ~ 75737495 (+) |
| LOC110496246 | LOC106561218 | coding | upstream | 112408 | 75726061 ~ 75730218 (+) |
| LOC110496295 | LOC106561258 | coding | downstream | 50788 | 75894189 ~ 75902042 (+) |
| LOC110496313 | fkbp4 | coding | downstream | 72236 | 75915637 ~ 75935997 (+) |
| LOC110496319 | b4galnt3 | coding | downstream | 96368 | 75939769 ~ 75982606 (+) |
| c2cd5 | LOC106561251 | coding | downstream | 150481 | 75993882 ~ 76053143 (+) |
| lmf2a | lmf2 | coding | downstream | 210581 | 76053982 ~ 76066679 (+) |
| G185186 | NA | non-coding | upstream | 61474 | 75773766 ~ 75781152 (+) |
| gcsha | LOC106561216 | non-coding | upstream | 180984 | 75656179 ~ 75661643 (+) |
| G184959 | NA | non-coding | upstream | 183570 | 75657844 ~ 75659056 (+) |
| G185205 | NA | non-coding | downstream | 360 | 75843761 ~ 75845575 (+) |
| G185211 | NA | non-coding | downstream | 12728 | 75856129 ~ 75856857 (+) |
| G185228 | NA | non-coding | downstream | 140649 | 75984050 ~ 75984401 (+) |
| G185326 | NA | non-coding | downstream | 260722 | 76104123 ~ 76104424 (+) |
| G185352 | ppp6r2 | non-coding | downstream | 307134 | 76150535 ~ 76150879 (+) |
| LOC110496136 | LOC106561223 | other | upstream | 755219 | 74991655 ~ 75145608 (+) |
| LOC110496116 | LOC106561204 | other | upstream | 956126 | 74828267 ~ 74890826 (+) |
| LOC110496107 | LOC106561202 | other | upstream | 1128512 | 74660359 ~ 74732682 (+) |
| G183361 | NA | other | upstream | 1307600 | 74529649 ~ 74535026 (+) |
| G182144 | NA | other | upstream | 2218108 | 73622536 ~ 73624518 (+) |
| LOC110496459 | LOC106561246 | other | downstream | 324256 | 76167573 ~ 76181555 (+) |
| G185462 | chkb | other | downstream | 590416 | 76433817 ~ 76434615 (+) |
| G185549 | LOC106561235 | other | downstream | 690977 | 76534378 ~ 76606975 (+) |
| G185718 | NA | other | downstream | 987012 | 76830413 ~ 76832500 (+) |
| LOC110502025 | LOC106573403 | other | downstream | 1304252 | 76863449 ~ 77160850 (+) |
