G185940


Basic Information

Item Value
gene id G185940
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75843775 ~ 75845314 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU210936
tgacatcattttctggaattttccaagctgcttaaaggcatagtcaacttagtgtgaacttctgacccactggaattgtgatacagtgaattataagcgaAATAATCcttctataaacaattgttggaaaaatgacttgtgtcatgcacaaagtagatgtcctaaccaacttgccaaaactatagtttgttaacaagagatttgtggagtggttgaaaaacaagttttaataactccaacctaagtgaatgtaaacttccgacgtcaACTGTATCACCTCCATCACATCATCAACTCTCACCTAGGGTTTTAGCTTTCCTCCTTGGCACTCTGTGTTTTGTGTTATAAGATGATAATGAGATGCTAAAACTACTTTTGATCCTGAAGAAGTGAGTCTGTCAGAGCAGCAGGGAGGGAAGACTGTTTCTCCTGAGTCCTGGTTTATAGTGTCTGACTTCTATatctgtgtgggagtgtgtgtgcatgtgaaggTATCGGGGTGTGatagtgtgtgacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcgcttgtATGCGGGCGTGTGTGAATACCATTGTAATCATCTCTGAGGTTTTGTTTCATGGGTCCAAGCCTCACACTCAGGTAAACACCAGTACTGACGACAATCTTATTTGATCTGCTACTTGTCAACTTTTAATCTTATTAATGATGTTCATATGATTAGTTCATAAAAACATTAATGTTGAATCTTATTAATTGATCATGTTCTAACATTCTAGCTTATTAGTCCTGTTGAATATTTAGTCTCACGTTGTGAATCTATACCCATTCTTTATTCATTCTCACATGATTCTACTCTTCACTGGACTGCTTGTCCCACAGGGATGTATATACACAaccagtatatacacacacacacacacacagagaaggactTACGAAGTAAGATATTTGTCAGAGTATTACATATGTTTGATTATTATTACTGATTGGTGTAACatctcttccttcccctctctctgagggCTGTGACACGCGGTGACCCACTGAGGCTGTCCTCTAAGTATCGCACCATATTTTTGGAGTACAGAAGAATAATGGATATGTGTATATAGGTGATTTATAGATTTAACATAGAAATAACGGACACAGTGCTGATGTGTGTATTTATACAGAGGGGAGGAAATTGTATTTAACTTGGAcaatcattttatttattttttcccaaCTATGGGCGCAACAGAACCCACTGTTACCACGGGAGACAGAACAGGCAGAACAGTTACCATGGAAACATACACAGAGATGACATCACTAAATTATCATAGTTAGAGTTATACTGTGGCTATGATCGCGCTAACGTAAGCATTAGATGGTTTAGTGGAAAATAAGCAGGAATCATAGTAGACATTTTAGCATGTTCTAAAACCCTAACATATtatcaccctaaccctagctctgagTCTGGCTCACCTGTCCTTCTTGGAGATGTGTTACACTATTGAGCACCTGTGCACCGACAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210936 True 1540 lncRNA 0.39 1 75843775 75845314

Neighbor

gene id symbol gene type direction distance location
LOC110501970 LOC106561217 coding downstream 141969 75688498 ~ 75701806 (-)
LOC118942024 NA coding downstream 180110 75661760 ~ 75663665 (-)
LOC110496199 LOC106561215 coding downstream 187611 75644341 ~ 75656164 (-)
LOC110496186 LOC106561212 coding downstream 236040 75595366 ~ 75607735 (-)
LOC118936395 rbm28 coding downstream 258639 75584557 ~ 75585136 (-)
LOC110496262 LOC106561255 coding upstream 1227 75846541 ~ 75885181 (-)
ddx11 ddx11 coding upstream 55893 75901207 ~ 75915303 (-)
tnni1c LOC106561253 coding upstream 139842 75985156 ~ 75989573 (-)
miox miox coding upstream 221486 76066800 ~ 76069833 (-)
adm2b adm2 coding upstream 249008 76093170 ~ 76099909 (-)
G185985 NA non-coding downstream 299 75842601 ~ 75843476 (-)
G185952 NA non-coding downstream 45666 75796577 ~ 75798109 (-)
G185951 NA non-coding downstream 47323 75796244 ~ 75796452 (-)
G185091 NA non-coding downstream 112465 75636331 ~ 75731310 (-)
G185092 NA non-coding downstream 118458 75721844 ~ 75725317 (-)
G185992 NA non-coding upstream 11149 75856463 ~ 75857678 (-)
G185939 fkbp4 non-coding upstream 25747 75871061 ~ 75935987 (-)
G186001 NA non-coding upstream 30881 75876195 ~ 75877130 (-)
G186006 NA non-coding upstream 42045 75887359 ~ 75887638 (-)
G186106 NA non-coding upstream 231104 76076418 ~ 76076724 (-)
G184006 LOC106561202 other downstream 1111138 74730872 ~ 74732637 (-)
G183538 NA other downstream 1732984 74106883 ~ 74110791 (-)
G183096 NA other downstream 1850230 73993078 ~ 73993545 (-)
G182882 NA other downstream 2167352 73676212 ~ 73676423 (-)
G186002 NA other upstream 32045 75877359 ~ 75878060 (-)
G186197 LOC106561241 other upstream 428210 76273524 ~ 76293392 (-)
si:dkey-234i14.6 LOC106561240 other upstream 476493 76321757 ~ 76341834 (-)

Expression


Co-expression Network