G186147


Basic Information

Item Value
gene id G186147
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 76176949 ~ 76178104 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU211160
acaaattgttaaacaaatcaaaatatattttatatttctgattcttcaaagtagccatcctttgccttgatgacagcttagcacactcttggcattctctcaaccagcatcaagAGTAtcaacctggaatgcatttcaattaacaggtgtgccttgttaaaagttaatgtggaatttctttccttcttaatgcgtttgagacagttgtgttgtgacaaggtagggttggtatacagaagatggccttttaccaaatagggctaagtccatattatggcaagaacagctcaaataagcaaagagaaacaacagtccatcattactttaagacatgaaggtcagtcaatatggaaaattaagaactttgaaagtttattcaagtgcagtcgcaaaagccatcaagcgctatgatgaaactggctccctCATGAGGATCGCagcagttacctctgctgcagaggataagttcattagaattaccagcctcagaaattgcagcccaaataaatgtttcagagttcaagtaacagacatcaactgttcagaggagactgtgtgagacTTGCTTGagtcaagaaacacaagcaatgaacattagaatggtggaaatctgtcctttggtctgattagaGATTTTTGGAGCCAAcggccatgtctttgtgagatacagagtaggtgaacggatgatctctgcatgtgaggttcccaccgtgaagcacgtgaagcatggaagaggtggtgtgatggtgctttgctggtgacaccatcagggatttatttagaattcaaggcacacaaccagcatggctacaacagcattctgtagcgatatgCCATTCCATCTAGTTTTTGCCtaaatgggactatcatttgtttttcaacaggacaatgacccaacacacctccaggctatgtattcgacctcaacccaacagatggtttgggatgagttggaccgcaaagtgaaggaaaagcagccaacaagtgctcagcatatgtggttgagataatgccaagagtgtacaaagctgtcaaggcaaagggcggctactttgaacaatcgcaaatatattttgatttgtttaacagtttttgggttactacatgacttaatgtgttatttcagagtttgtcttcactattaaatcaacaatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211160 True 1156 lncRNA 0.40 1 76176949 76178104

Neighbor

gene id symbol gene type direction distance location
ppp6r2b ppp6r2 coding downstream 8793 76135363 ~ 76168156 (-)
adm2b adm2 coding downstream 77040 76093170 ~ 76099909 (-)
miox miox coding downstream 107116 76066800 ~ 76069833 (-)
tnni1c LOC106561253 coding downstream 187892 75985156 ~ 75989573 (-)
ddx11 ddx11 coding downstream 261646 75901207 ~ 75915303 (-)
LOC110496478 kcp coding upstream 10216 76188320 ~ 76231575 (-)
LOC110496468 LOC106561244 coding upstream 31235 76209339 ~ 76212919 (-)
si:dkey-234i14.6 LOC106561240 coding upstream 143653 76321757 ~ 76341834 (-)
prpf18 prpf18 coding upstream 187567 76365671 ~ 76379828 (-)
LOC100329197 LOC100329197 coding upstream 222116 76400220 ~ 76410715 (-)
G186060 LOC108264052 non-coding downstream 3951 76172765 ~ 76172998 (-)
G186146 NA non-coding downstream 5423 76171298 ~ 76171526 (-)
G186127 NA non-coding downstream 58022 76118495 ~ 76118927 (-)
G186123 NA non-coding downstream 69936 76106778 ~ 76107013 (-)
G186121 NA non-coding downstream 73904 76102730 ~ 76103045 (-)
G186063 NA non-coding upstream 50 76178154 ~ 76178909 (-)
G186056 NA non-coding upstream 1939 76180043 ~ 76181555 (-)
G186191 LOC106561242 non-coding upstream 88252 76266356 ~ 76268311 (-)
G186211 NA non-coding upstream 125513 76303617 ~ 76303841 (-)
G186216 NA non-coding upstream 128683 76306787 ~ 76307123 (-)
G186002 NA other downstream 298889 75877359 ~ 75878060 (-)
LOC110496186 LOC106561212 other downstream 570301 75595366 ~ 75607735 (-)
G184006 LOC106561202 other downstream 1444312 74730872 ~ 74732637 (-)
G186197 LOC106561241 other upstream 95420 76273524 ~ 76293392 (-)
LOC110496628 rabl2b other upstream 991859 77166074 ~ 77171661 (-)
G187490 NA other upstream 1292289 77470393 ~ 77471675 (-)
G187579 LOC106561332 other upstream 1524795 77702899 ~ 77703489 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G126650 NA non-coding NC_035910.1 CM008313.1 32440536 ~ 32443609 (-)