Gene
RNA
| Item | Value |
|---|---|
| gene id | G185367 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 76187575 ~ 76187870 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: circadian locomoter output cycles protein kaput-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU210272 | True | 296 | lncRNA | 0.35 | 1 | 76187575 | 76187870 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496459 | LOC106561246 | coding | upstream | 6020 | 76167573 ~ 76181555 (+) |
| lmf2a | lmf2 | coding | upstream | 120896 | 76053982 ~ 76066679 (+) |
| c2cd5 | LOC106561251 | coding | upstream | 134432 | 75993882 ~ 76053143 (+) |
| LOC110496319 | b4galnt3 | coding | upstream | 204969 | 75939769 ~ 75982606 (+) |
| LOC110496313 | fkbp4 | coding | upstream | 251578 | 75915637 ~ 75935997 (+) |
| LOC110496485 | LOC106561242 | coding | downstream | 78533 | 76266403 ~ 76272163 (+) |
| cd9a | LOC106561241 | coding | downstream | 85642 | 76273512 ~ 76293411 (+) |
| LOC110496527 | sephs1 | coding | downstream | 201659 | 76389529 ~ 76398538 (+) |
| LOC100135907 | LOC100135907 | coding | downstream | 343549 | 76531419 ~ 76537667 (+) |
| mapk8ip2 | arsa | coding | downstream | 350806 | 76538676 ~ 76714965 (+) |
| G185352 | ppp6r2 | non-coding | upstream | 36696 | 76150535 ~ 76150879 (+) |
| G185326 | NA | non-coding | upstream | 83151 | 76104123 ~ 76104424 (+) |
| G185228 | NA | non-coding | upstream | 203174 | 75984050 ~ 75984401 (+) |
| G185211 | NA | non-coding | upstream | 330718 | 75856129 ~ 75856857 (+) |
| G185205 | NA | non-coding | upstream | 342000 | 75843761 ~ 75845575 (+) |
| G185376 | kcp | non-coding | downstream | 15386 | 76203256 ~ 76204036 (+) |
| G185424 | NA | non-coding | downstream | 112465 | 76300335 ~ 76300615 (+) |
| G185431 | NA | non-coding | downstream | 121084 | 76308954 ~ 76310593 (+) |
| G185450 | NA | non-coding | downstream | 156122 | 76343992 ~ 76344405 (+) |
| G185457 | NA | non-coding | downstream | 163159 | 76351029 ~ 76351362 (+) |
| LOC110496136 | LOC106561223 | other | upstream | 1100168 | 74991655 ~ 75145608 (+) |
| LOC110496116 | LOC106561204 | other | upstream | 1301075 | 74828267 ~ 74890826 (+) |
| LOC110496107 | LOC106561202 | other | upstream | 1473461 | 74660359 ~ 74732682 (+) |
| G183361 | NA | other | upstream | 1652549 | 74529649 ~ 74535026 (+) |
| G185462 | chkb | other | downstream | 245947 | 76433817 ~ 76434615 (+) |
| G185549 | LOC106561235 | other | downstream | 346508 | 76534378 ~ 76606975 (+) |
| G185718 | NA | other | downstream | 642543 | 76830413 ~ 76832500 (+) |
| LOC110502025 | LOC106573403 | other | downstream | 959783 | 76863449 ~ 77160850 (+) |
| LOC110496763 | dynlrb2 | other | downstream | 1589257 | 77777066 ~ 77780795 (+) |
