G185463


Basic Information

Item Value
gene id G185463
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 76354349 ~ 76400765 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU210393
ACTAAATACAATTTAGTGTATgttatcttctgacccactgggaatgtgatgaaaaaaataaaagctgaaatgaaacattctctattattctgacatttcacaaataaagtggtgatcctaactgacctaagacagggaatttttactaggattaaatgtcaggaattttgaattcttaagtttacatacaccttagccaaatacatttaaactcagtttttcacaattcctgacatttaatcctaataaaaattccctgtcttaggtcagttaggatcaccactttattttaagaatgtgaaatgtcagaataatagtagagaattattatttcagcttttatttctttcatcacattcccagtgggtcaaaagtttacactcaattagtatttggtagcattgcctttaaattgtttaacttgggtcaaaagtttcaggtagccttccacaagcttcccacaataagttgggtggcttaaggactttgttgtccttaaaccattttaccacaactttggaagtatgcttggggtcattgtccatttggaagacccatttgtgactaagctttaacttcctgactgatgtcttgagatgttgcatcaatatatacacataattttctacctcatgatgccatctattttgtgaagtgcaccagtccctcctgcagcaaagcacccccacaacatgatgctgccacccctgtgcttcacggttgagatggtgttcttcggcttgcaagcctccccctttttcctccaagcataacgatggtcattatggcctaacagttctatttttgtttcatcagaccagaggacatttctgcaaaaaatacaatctttgtccccatgtgcagttgcaaaccatagtctggctctttatggcggttttggagcagtagcttcttccttgctgagcggcctttcaggttatgtcgatataggactagttttactgtggatatagataattttgtacctgtttcctccagaattttcacaaggtcctttgctgttgttttgggattgatttgcacttttcgcaccaacaaatgttcatctctaggagacagaatgcgtctccttcctgagcgggtATGATGGctgggtggtcccatggtgtttatacttgcttactattgtttgtacagatgaacgtggtaccttcaggcgtttggacattttttgtcttggctgatttcatttgattttcccatgatgtcaagcaaagaggcactgagtttgaaggtaggccttgaaatacatccacaagtacacctccaattgactcaaatgatgtcaattatcctatcacaagcttctaaagccatgacataattttctggaattttccaagctgtttaaaggcccattcaacatagtgtatgtaaacttctgacccactggaattgtgatacagtgagttataagtgaaataatctgtaaacaattgttggaaaaattacttgccaaaactatagtttgttaacaagaaatttgtggagtgggtaaaaaacgagttttaatgactccaacagaagtgtatgtaaactttcgacttcaactgtacatacgaTTCAGATAACAGATTCAGATATACTACCTTATATATTACAACACTTAAATACTCAAAACAGTGCTATTTACAAGTGTACACATATTACAATCAGATGCAAATTCAACTGCCTTTGAACTAAACAGATGCCTTGCCTATCCTTAACCTACATTACTATATCATATGAATCAATGTTCTTTAAGGCTACACTACACCAAGGCATTTTGTGCTTCATTGCTCTTGCCAAAATTGGTTCAATACTATGCTAAAAATTCACAGCCATTTTATAGAAGGGATAGTCATAATGCTTTATTAAATATTTATTTCTACAAAACAATTCCCTCCTGCTAACTTAGTAAATATCCAAAAGATCTATAACTTGACCCATTCTAAAGGCGTTACCCAGAAGAGACTAGCCGTTTTGGAAATAATGTAATGTCACAGAGCATGAAAATGTGGTATGAAGTCTATAAAGACCTTTCAGTCTGTCTACTCATCACATCTCTTTCTTGTCGTTTTGGTCGAATAGCGCACGAATGTCCAGCATGGCCTGTCGAATGTTCTGTCCAAAGCGATACGAGT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210393 True 2144 lncRNA 0.39 2 76354349 76400765

Neighbor

gene id symbol gene type direction distance location
cd9a LOC106561241 coding upstream 60938 76273512 ~ 76293411 (+)
LOC110496485 LOC106561242 coding upstream 82186 76266403 ~ 76272163 (+)
LOC110496459 LOC106561246 coding upstream 172794 76167573 ~ 76181555 (+)
lmf2a lmf2 coding upstream 287670 76053982 ~ 76066679 (+)
c2cd5 LOC106561251 coding upstream 301206 75993882 ~ 76053143 (+)
LOC100135907 LOC100135907 coding downstream 130654 76531419 ~ 76537667 (+)
mapk8ip2 arsa coding downstream 137911 76538676 ~ 76714965 (+)
LOC110502025 LOC106573403 coding downstream 462684 76863449 ~ 77160850 (+)
LOC110496661 LOC106561266 coding downstream 894322 77295087 ~ 77387938 (+)
nfat5a LOC106561332 coding downstream 1296461 77697226 ~ 77716788 (+)
G185459 NA non-coding upstream 1042 76353089 ~ 76353307 (+)
G185457 NA non-coding upstream 2987 76351029 ~ 76351362 (+)
G185450 NA non-coding upstream 9944 76343992 ~ 76344405 (+)
G185431 NA non-coding upstream 43756 76308954 ~ 76310593 (+)
G185424 NA non-coding upstream 53734 76300335 ~ 76300615 (+)
G185461 NA non-coding downstream 15450 76416215 ~ 76418354 (+)
G185624 arsa non-coding downstream 279843 76680608 ~ 76681061 (+)
G185717 NA non-coding downstream 427384 76828149 ~ 76833657 (+)
G185783 NA non-coding downstream 527153 76927918 ~ 76932510 (+)
LOC110496136 LOC106561223 other upstream 1266942 74991655 ~ 75145608 (+)
LOC110496116 LOC106561204 other upstream 1467849 74828267 ~ 74890826 (+)
LOC110496107 LOC106561202 other upstream 1640235 74660359 ~ 74732682 (+)
G183361 NA other upstream 1819323 74529649 ~ 74535026 (+)
G185462 chkb other downstream 33052 76433817 ~ 76434615 (+)
G185549 LOC106561235 other downstream 133613 76534378 ~ 76606975 (+)
G185718 NA other downstream 429648 76830413 ~ 76832500 (+)
LOC110496763 dynlrb2 other downstream 1376362 77777066 ~ 77780795 (+)

Expression


Co-expression Network