G185916


Basic Information

Item Value
gene id G185916
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 77166111 ~ 77167067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU210909
ACACAATTGTGCAACATTTTTGAGGACCCATTTGCCTTGTGATCACTACTTTCAAAACGAATGAATTATGCAAAACCTCTGGAGCATCATTTTAAGAGCTCAATTAAATCTGTATCTGCATTCATTATAgctcaatttaaaggcaatattcCTGCATTCCCGGAGACTGCCTTCATTGTAAACGCTGCAAAATGTCAGCTCATTCGGGAATAACCTTTACATTTCAGCTCGGGATACATCAGGGATAAGGATTGAATCCAGCCCGAAGAGGTCTAATACACTTAGATCGAGAACCTCTGAAGTGGTCATTCGTTGTAGTTCTGAGGTATCTTCAGTACTTCTGCAACACTTCCAGTTGACTAAAATGTAcaccgagtatacaaaacattaagaacacctgttctttctatgacagactgaccaggtgaaagctactgtatgatcccttattgatgtcacttgctaaatccacttcaatcagtgtagatgaagggaaggagacaggttaaaggatttttaagccttgagacatggattgtgtatgtgcgccattcacagggtgaatgggcaagacaaaatatttaagtgcctttgaacggggtatggtagtaggtcccaggcacactggtttgtgtcaagaactgcaacgctgctgtttttttcacactcaacagtttcccgtgtgaatcaatggtccaccacccaacttgacacaactgtgggaagcattggagtcaacatgggccagcatctctgtgtaatgctttcgacactttgtactgtccatgccccgatgatttgaggctgttctgagagcaaaaggggTGAGAGGTGagatatacactcagtgtatatctaacCTGTACATTGATAACTATATCAGTAACTGCACTGGAATGAATTATTGGTGACATTGATGCAGTCTTTTTACTGATGCAGCCAGGTCACAAGTGTTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210909 True 957 lncRNA 0.36 1 77166111 77167067

Neighbor

gene id symbol gene type direction distance location
LOC110502025 LOC106573403 coding upstream 6267 76863449 ~ 77160850 (+)
mapk8ip2 arsa coding upstream 492038 76538676 ~ 76714965 (+)
LOC100135907 LOC100135907 coding upstream 628444 76531419 ~ 76537667 (+)
LOC110496527 sephs1 coding upstream 767573 76389529 ~ 76398538 (+)
cd9a LOC106561241 coding upstream 872700 76273512 ~ 76293411 (+)
LOC110496661 LOC106561266 coding downstream 128020 77295087 ~ 77387938 (+)
nfat5a LOC106561332 coding downstream 530159 77697226 ~ 77716788 (+)
LOC110496763 dynlrb2 coding downstream 609999 77777066 ~ 77780795 (+)
LOC110502056 LOC106561330 coding downstream 671701 77838768 ~ 77882208 (+)
LOC100135906 LOC100135906 coding downstream 796434 77963501 ~ 77969044 (+)
G185915 NA non-coding upstream 120 77165775 ~ 77165991 (+)
G185695 NA non-coding upstream 503 77162015 ~ 77165608 (+)
G185783 NA non-coding upstream 233601 76927918 ~ 76932510 (+)
G185717 NA non-coding upstream 332454 76828149 ~ 76833657 (+)
G185917 NA non-coding downstream 1530 77168597 ~ 77168898 (+)
G186716 NA non-coding downstream 31902 77198969 ~ 77199174 (+)
G186717 NA non-coding downstream 32661 77199728 ~ 77200010 (+)
G186718 NA non-coding downstream 39020 77206087 ~ 77206384 (+)
G186736 NA non-coding downstream 54052 77221119 ~ 77221371 (+)
G185718 NA other upstream 333611 76830413 ~ 76832500 (+)
G185549 LOC106561235 other upstream 559136 76534378 ~ 76606975 (+)
G185462 chkb other upstream 731496 76433817 ~ 76434615 (+)
LOC110496459 LOC106561246 other upstream 996816 76167573 ~ 76181555 (+)
LOC110502077 LOC106561326 other downstream 880820 78047373 ~ 78066844 (+)
G187260 NA other downstream 970446 78137513 ~ 78177583 (+)
G187320 LOC106561323 other downstream 1100222 78267289 ~ 78270045 (+)
LOC110496993 LOC106561317 other downstream 1317757 78467699 ~ 78519071 (+)

Expression


Co-expression Network