G186697



Basic Information


Item Value
gene id G186697
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 77182629 ~ 77182852 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU211750
CACACATTCTgcctagaactaacctctccttTCATATAGGACAACACTGCCCTCCAGTGTGTCCTCTCCTCAAATCAGAAACCCTTTTACATGTCTTAGTAAACTGATGGAGAGAATTgggtttgaccaaatacaatgctgtttttcagagaacaagttaactactgactttgagcatgcatatagagaagggcactcaattTGTACTGCACTCAGGTGACAGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU211750 True 224 lncRNA 0.42 1 77182629 77182852

Neighbor


gene id symbol gene type direction distance location
LOC100136242 odf3 coding downstream 5833 77171774 ~ 77176796 (-)
LOC110496628 rabl2b coding downstream 10968 77166074 ~ 77171661 (-)
arsa arsa coding downstream 492185 76676054 ~ 76690444 (-)
LOC110496598 LOC106561235 coding downstream 574571 76602051 ~ 76608058 (-)
LOC110496614 LOC106561236 coding downstream 592383 76584782 ~ 76590246 (-)
wwox wwox coding upstream 203617 77386469 ~ 77682973 (-)
LOC110496686 NA coding upstream 532846 77715698 ~ 77745029 (-)
nudt7 nudt7 coding upstream 562874 77745726 ~ 77749429 (-)
LOC110496739 LOC106561348 coding upstream 569687 77752539 ~ 77759288 (-)
LOC110496728 LOC100194665 coding upstream 577875 77760727 ~ 77764403 (-)
G186491 NA non-coding downstream 357338 76824478 ~ 76825291 (-)
G186353 NA non-coding downstream 525118 76608644 ~ 76657511 (-)
G186309 NA non-coding downstream 660540 76521845 ~ 76522089 (-)
G186306 NA non-coding downstream 664375 76517847 ~ 76518254 (-)
G186706 NA non-coding upstream 9366 77192218 ~ 77192523 (-)
G186713 NA non-coding upstream 13941 77196793 ~ 77197074 (-)
G186719 NA non-coding upstream 23165 77206017 ~ 77206295 (-)
G186735 NA non-coding upstream 37856 77220708 ~ 77220963 (-)
si:dkey-234i14.6 LOC106561240 other downstream 858739 76321757 ~ 76341834 (-)
G186197 LOC106561241 other downstream 889237 76273524 ~ 76293392 (-)
adm2b adm2 other downstream 1082779 76093170 ~ 76099909 (-)
tnni1c LOC106561253 other downstream 1193056 75985156 ~ 75989573 (-)
G187490 NA other upstream 287541 77470393 ~ 77471675 (-)
G187579 LOC106561332 other upstream 520047 77702899 ~ 77703489 (-)
G188257 NA other upstream 1433730 78616582 ~ 78617307 (-)
G189093 slc1a2 other upstream 2040378 79223230 ~ 79224998 (-)
G189256 NA other upstream 2182997 79365849 ~ 79366569 (-)

Expression



Co-expression Network