G186826


Basic Information

Item Value
gene id G186826
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 77389713 ~ 77394282 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU211889
ACTCTCCACAGAGTGCATGCTTATGTGAATGTGGTAAATACAGACCAGGGGCAACACTGTCTGTCCACAAAACAACACGATCTCTGTAGAATACCACAATAACTGTAGGAAGGTGGCGACTGTTCATCCAGATTTGACGTAAAACACACCCAAAATATGTTGCACTTGATATTTCTACAGCTGCAATATTTTGTAGTTGTTTTGTGGACGTTTGCACACTGCGAGGGCTGTTTTCTGGACAGAGGATGTGGCCCACGGTGTTCTAGACTGGGGAGGAAGGAGCAGCTCTTCTCATTGGGAGTGGGGAGCCAGAGGGTTCTGTAAACTCTCTATAAGGGAACATACAGTATCTATGCCATGATTACACATCTGTATATGTTCACATCATCTAGGGGTTCATGAGGGAAGTcagactgtagagtagagtagagagcaaCGGTCCTAAACAGTAAACATTGTAGTACATGCTGTTTGCCACAGTAAAGAGTGAGATACACCGGTAAAGAGTGATgatgagatgatgatgatgagaataGTGCTCTTGTACACAAACGTCATATACAGTACAGGCATGCACACGCTCGCAAaccccccctcctttctctcttctctttctaagAGCAGACAGCCTGTAACACTATCTACCCTACACCCTCTAATTGAGTGGGAAATGACTACTCAGAAGCTGTGTTTCTCAGTTTAACATCTCAAATCCAGCTTACAGTAGTCTGTAGTCACACTGTACTGAGACATGCCGCCCTAATGCAGCACCAGCCGGCACAGTCGGTAATTAGGAgcggcgagagggagagagggagtgcgaTTCCACAGCGtttgaaacagagagaggaagaaacagacATCAGAGAGTATTACAGCCAGAATTCAGGCGCTCAGAGGATCTTTCATGTAGCCCTGCTGCTGGCTAAAAACTGCTGTGACGTTATGAGAAGACAGGAGACTGTTCTGGAGATGACTTCTATAGACGCATGAAATACTTCTCTCTGGCTAACTGCTCTTTATCTACAAATGAGACTGGGGGGGAGGACTGGTGAGAGACTGCAGTGCAGAGCAGTTTAGTACAGTGCACTGGCAGAGCAGCAAGGgtctgtacacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttcaaaggCACAGCCTCATTGAGGCTCATTTGAGCATCTGCAGCCCAAGCTGGCAGAGGCTAATACAGAGAGTCACACATATGGAGATATACCAGAACTgttccagcacacacacacactggctgtcATTAAGATCTagcaacacacacagtcacacaatgtacacacaatgtacacacagtaacacacagtcacacaatgtacacacagtcacactcagtctcacacatgtacacacagtcacacaatgtacacacagtctcacacatgtacacacaatgtacacacagtcacacacatgcacacatagtcacacacatgcacacatagtcACACAATGTACACGCAGTCACACAgtgtacacacagtcacacagtcacagaataaagtgcatgcatacatacacagacatatAGTACTCTCTCattgagcagacagacacactcatCAAACTTCCTTCTCAGTGCTGGTAGTAGCAGAGGCAGATTGAGGCGGTTTGAAACCGCAGATGAAACAACTgcatctctctgctgtctccctccctgccagCACACTGATAACTCTACACACCTCACAGGACTGGCATATCAAAGGCTCACACATGTCACTCAGTGTCAAAGAGACACACCCAGACCCACATATACGGACTTCAAAAGCAGGGTGTCAGATCATTTAGCTAACCAGTCACCCTCAGGTATCTGCTTTAGAACGTAGACGTGGAAGATGCAATATATTTACCTGCCTGCTCATCTTACTCTACTTCCAGGGTCATCTCTGTTTTAGGTGAAAGGTGGACCATCAATACATTGGAATGATTTACACCTGATCTGAGAACGCAGCTCTACAGCACAGCAGGGAATTCTGTCTGAGGGAGACAACCAAGATATGTACACAGCAGAAGGAGAgcgagggtgaaagagagagggagagagagagtgtgtgtgtgtgttatcttctTGGTGTTCAGCTCGGCCCTCCCACTACATGACCTTTTTACCCGTGTAAGAGATAAGCCTGATGAGTTTAGCATGCTAGACATTAACATGTGGaaccacccaccaccactatctatcagagagacatagagagaagaAAGGGAATGTGCTGGGCTGGTGacatgcatacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaaatccctCCTGACATGTACAGTAGCCCAACAGATGTGTATAATCATGTACATTATAAATAATACCTGTACATTCTAGGTGTCGACCAACCAATGGCTCTTTCTATTTGTGTACTAGTATTTGTCAATGTAAATCCTGATTCTGATATACATAGTTTTACAGAGTTGACAGAGAGAAATGACTGGTTTTCTTGGGGTTGGTATGTTATGTTCCTATCAGACAGAACTGACCACTGCAAACTGGTGAGTGGAGAGGAAAGGGTTAATTGAGTGTAAGCCCGAGCACCTGTCCCCGAGACATCACATGAATCACCAGAACTACAAGGGGAAGGGAAGCGGGAAAAATAAAACTCTTTCACCATCACTTCAGCAATATACAAGAAATGTGACAAACCGAAGTAGCAGGGTCCTAGCCAACAAGATCTTTTCCAGACCACTTAAACACACAAACCCAACCTCTGCAATCTCTATGCTTTAAGAGCTGCAATAAACAGGTCCTAGATCAGCAGCAATAACCTGACCATGTCTGGCCTGAACCATCACTGCTCTGGAAAATAGTCCTGGATCACATTTATGTCTTCCAATTTTCAACATAATGAAAATATTTCCAAtgtctttggaaagtattctgCAATATTTAACTGTTGAACAGCCACTCTTCAATGTATTAAGAAGCAAGGTCAGAGACAAGGGAGATATTGGTGTTGAATCATTAAAGGGTAACTATACTGTACCTCAGAGTTGTTCGGTGTTGTTTTCATagtataacatgttactgtcgtGATCTCTAACCATGTCTAATCCCTCTGTGCTTGTACAGTACAGCAATACTAGATGATGCATTGTGCTATTTGTTAGCATAGGACTAATGCACcaggaagagaaaaaaaacaggtttGTTTCTGCCTCATCAAGGTTGTGCACTGTCATTCTGTCATACGAGCGTTCTCTGATAATATGCGTGTGACCCTTTTATGACATTGTATTTATGACATTGACCTGTAAATACACCCAGTACTGTGGAGCAGTCTGTTCGTGGCCCAGCCCGTCCTGTCCTGTACAAAGGAACATGTAAATAGCAAACCGCTATGCATGCTGACACTCTAGCACTTCTTTCAGGTACTTTTATAATCCCAAACTCCTCATACGGCATGTCCTGAAAATCATCTGTGAACACGGCAAATAAAAAgagaataataaaaaaaaaacaagatgtCAGACGATGACATCCTGGACAACGTGTAAAGTCCGACAGTTTTCTTACTCTTGTGGGTGGTTCACTTCTGTTCCTTTAACTGTCATTCTGTCATTCTTAATGTGGTTAAACCATTCTGGTCAAGGTTCTGTTCAGTTGTCTTGGTGTGTGAAGGGTCGAGGCAAAGCAGAGAGGCAATCTGTGTGTTAACAACTAAAGCCTGGTTAAGAGTCTGTCCACATCTGTCACAGGGCAGCATAGTCCTCTCTTGTTGTGCCGAGAGCAGACATGACTGGCTCTGGCAAAACACACAGGGGGGCACTGATTGTGATTTAACACGGTTCTGTTTTAAGGAACTAGAATTGGAACTAGGCTATATAACAAGCTTATATGATGACAGAAGATAATATGAGCAGTAAAAGAGCTTTGCCTCAGCCCTAGGACCCAGTCTGTCTGAACTAACAGTCTCACATGAAGGTCTATCTATGCCATGATGGAGAAGATGGGACTCCAACAGGACTTTGTGCTTTTGTTGATACTTTAGGAATGTTTATTTCCAACCC
>TU211892
ACTCTCCACAGAGTGCATGCTTATGTGAATGTGGTAAATACAGACCAGGGGCAACACTGTCTGTCCACAAAACAACACGATCTCTGTAGAATACCACAATAACTGTAGGAAGGTGGCGACTGTTCATCCAGATTTGACGTAAAACACACCCAAAATATGTTGCACTTGATATTTCTACAGCTGCAATATTTTGTAGTTGTTTTGTGGACGTTTGCACACTGCGAGGGCTGTTTTCTGGACAGAGGATGTGGCCCACGGTGTTCTAGACTGGGGAGGAAGGAGCAGCTCTTCTCATTGGGAGTGGGGAGCCAGAGGGTTCTGTAAACTCTCTATAAGGGAACATACAGTATCTATGCCATGATTACACATCTGTATATGTTCACATCATCTAGGGGTTCATGAGGGAAGTcagactgtagagtagagtagagagcaaCGGTCCTAAACAGTAAACATTGTAGTACATGCTGTTTGCCACAGTAAAGAGTGAGATACACCGGTAAAGAGTGATgatgagatgatgatgatgagaataGTGCTCTTGTACACAAACGTCATATACAGTACAGGCATGCACACGCTCGCAAaccccccctcctttctctcttctctttctaagAGCAGACAGCCTGTAACACTATCTACCCTACACCCTCTAATTGAGTGGGAAATGACTACTCAGAAGCTGTGTTTCTCAGTTTAACATCTCAAATCCAGCTTACAGTAGTCTGTAGTCACACTGTACTGAGACATGCCGCCCTAATGCAGCACCAGCCGGCACAGTCGGTAATTAGGAgcggcgagagggagagagggagtgcgaTTCCACAGCGtttgaaacagagagaggaagaaacagacATCAGAGAGTATTACAGCCAGAATTCAGGCGCTCAGAGGATCTTTCATGTAGCCCTGCTGCTGGCTAAAAACTGCTGTGACGTTATGAGAAGACAGGAGACTGTTCTGGAGATGACTTCTATAGACGCATGAAATACTTCTCTCTGGCTAACTGCTCTTTATCTACAAATGAGACTGGGGGGGAGGACTGGTGAGAGACTGCAGTGCAGAGCAGTTTAGTACAGTGCACTGGCAGAGCAGCAAGGgtctgtacacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttcaaaggCACAGCCTCATTGAGGCTCATTTGAGCATCTGCAGCCCAAGCTGGCAGAGGCTAATACAGAGAGTCACACATATGGAGATATACCAGAACTgttccagcacacacacacactggctgtcATTAAGATCTagcaacacacacagtcacacaatgtacacacaatgtacacacagtaacacacagtcacacaatgtacacacagtcacactcagtctcacacatgtacacacagtcacacaatgtacacacagtctcacacatgtacacacaatgtacacacagtcacacacatgcacacatagtcacacacatgcacacatagtcACACAATGTACACAGTCACACAatgtacacacagtcacacacatgtacacacagtcacacacatgcacacatagtcacacacatgcacacatagtcACACAATGTACACGCAGTCACACAgtgtacacacagtcacacagtcacagaataaagtgcatgcatacatacacagacatatAGTACTCTCTCattgagcagacagacacactcatCAAACTTCCTTCTCAGTGCTGGTAGTAGCAGAGGCAGATTGAGGCGGTTTGAAACCGCAGATGAAACAACTgcatctctctgctgtctccctccctgccagCACACTGATAACTCTACACACCTCACAGGACTGGCATATCAAAGGCTCACACATGTCACTCAGTGTCAAAGAGACACACCCAGACCCACATATACGGACTTCAAAAGCAGGGTGTCAGATCATTTAGCTAACCAGTCACCCTCAGGTATCTGCTTTAGAACGTAGACGTGGAAGATGCAATATATTTACCTGCCTGCTCATCTTACTCTACTTCCAGGGTCATCTCTGTTTTAGGTGAAAGGTGGACCATCAATACATTGGAATGATTTACACCTGATCTGAGAACGCAGCTCTACAGCACAGCAGGGAATTCTGTCTGAGGGAGACAACCAAGATATGTACACAGCAGAAGGAGAgcgagggtgaaagagagagggagagagagagtgtgtgtgtgtgttatcttctTGGTGTTCAGCTCGGCCCTCCCACTACATGACCTTTTTACCCGTGTAAGAGATAAGCCTGATGAGTTTAGCATGCTAGACATTAACATGTGGaaccacccaccaccactatctatcagagagacatagagagaagaAAGGGAATGTGCTGGGCTGGTGacatgcatacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaaatccctCCTGACATGTACAGTAGCCCAACAGATGTGTATAATCATGTACATTATAAATAATACCTGTACATTCTAGGTGTCGACCAACCAATGGCTCTTTCTATTTGTGTACTAGTATTTGTCAATGTAAATCCTGATTCTGATATACATAGTTTTACAGAGTTGACAGAGAGAAATGACTGGTTTTCTTGGGGTTGGTATGTTATGTTCCTATCAGACAGAACTGACCACTGCAAACTGGTGAGTGGAGAGGAAAGGGTTAATTGAGTGTAAGCCCGAGCACCTGTCCCCGAGACATCACATGAATCACCAGAACTACAAGGGGAAGGGAAGCGGGAAAAATAAAACTCTTTCACCATCACTTCAGCAATATACAAGAAATGTGACAAACCGAAGTAGCAGGGTCCTAGCCAACAAGATCTTTTCCAGACCACTTAAACACACAAACCCAACCTCTGCAATCTCTATGCTTTAAGAGCTGCAATAAACAGGTCCTAGATCAGCAGCAATAACCTGACCATGTCTGGCCTGAACCATCACTGCTCTGGAAAATAGTCCTGGATCACATTTATGTCTTCCAATTTTCAACATAATGAAAATATTTCCAAtgtctttggaaagtattctgCAATATTTAACTGTTGAACAGCCACTCTTCAATGTATTAAGAAGCAAGGTCAGAGACAAGGGAGATATTGGTGTTGAATCATTAAAGGGTAACTATACTGTACCTCAGAGTTGTTCGGTGTTGTTTTCATagtataacatgttactgtcgtGATCTCTAACCATGTCTAATCCCTCTGTGCTTGTACAGTACAGCAATACTAGATGATGCATTGTGCTATTTGTTAGCATAGGACTAATGCACcaggaagagaaaaaaaacaggtttGTTTCTGCCTCATCAAGGTTGTGCACTGTCATTCTGTCATACGAGCGTTCTCTGATAATATGCGTGTGACCCTTTTATGACATTGTATTTATGACATTGACCTGTAAATACACCCAGTACTGTGGAGCAGTCTGTTCGTGGCCCAGCCCGTCCTGTCCTGTACAAAGGAACATGTAAATAGCAAACCGCTATGCATGCTGACACTCTAGCACTTCTTTCAGGTACTTTTATAATCCCAAACTCCTCATACGGCATGTCCTGAAAATCATCTGTGAACACGGCAAATAAAAAgagaataataaaaaaaaaacaagatgtCAGACGATGACATCCTGGACAACGTGTAAAGTCCGACAGTTTTCTTACTCTTGTGGGTGGTTCACTTCTGTTCCTTTAACTGTCATTCTGTCATTCTTAATGTGGTTAAACCATTCTGGTCAAGGTTCTGTTCAGTTGTCTTGGTGTGTGAAGGGTCGAGGCAAAGCAGAGAGGCAATCTGTGTGTTAACAACTAAAGCCTGGTTAAGAGTCTGTCCACATCTGTCACAGGGCAGCATAGTCCTCTCTTGTTGTGCCGAGAGCAGACATGACTGGCTCTGGCAAAACACACAGGGGGGCACTGATTGTGATTTAACACGGTTCTGTTTTAAGGAACTAGAATTGGAACTAGGCTATATAACAAGCTTATATGATGACAGAAGATAATATGAGCAGTAAAAGAGCTTTGCCTCAGCCCTAGGACCCAGTCTGTCTGAACTAACAGTCTCACATGAAGGTCTATCTATGCCATGATGGAGAAGATGGGACTCCAACAGGACTTTGTGCTTTTGTTGATACTTTAGGAATGTTTATTTCCAACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211889 False 4179 lncRNA 0.50 2 77389713 77394282
TU211892 True 4275 lncRNA 0.38 2 77389713 77394282

Neighbor

gene id symbol gene type direction distance location
LOC110496661 LOC106561266 coding upstream 83247 77295087 ~ 77387938 (+)
LOC110502025 LOC106573403 coding upstream 229869 76863449 ~ 77160850 (+)
mapk8ip2 arsa coding upstream 715640 76538676 ~ 76714965 (+)
LOC100135907 LOC100135907 coding upstream 852046 76531419 ~ 76537667 (+)
LOC110496527 sephs1 coding upstream 991175 76389529 ~ 76398538 (+)
nfat5a LOC106561332 coding downstream 302944 77697226 ~ 77716788 (+)
LOC110496763 dynlrb2 coding downstream 382784 77777066 ~ 77780795 (+)
LOC110502056 LOC106561330 coding downstream 444486 77838768 ~ 77882208 (+)
LOC100135906 LOC100135906 coding downstream 569219 77963501 ~ 77969044 (+)
fbxl13 fbxl13 coding downstream 577562 77971844 ~ 78003571 (+)
G186824 NA non-coding upstream 5123 77383776 ~ 77384590 (+)
G186751 NA non-coding upstream 135586 77242039 ~ 77254127 (+)
G186736 NA non-coding upstream 168342 77221119 ~ 77221371 (+)
G186718 NA non-coding upstream 183329 77206087 ~ 77206384 (+)
G186835 NA non-coding downstream 12520 77406802 ~ 77408255 (+)
G186837 NA non-coding downstream 16094 77410376 ~ 77411754 (+)
G186869 NA non-coding downstream 80728 77475010 ~ 77477871 (+)
G186896 NA non-coding downstream 111130 77505412 ~ 77537308 (+)
G186938 NA non-coding downstream 162204 77556486 ~ 77556772 (+)
G185718 NA other upstream 557213 76830413 ~ 76832500 (+)
G185549 LOC106561235 other upstream 782738 76534378 ~ 76606975 (+)
G185462 chkb other upstream 955098 76433817 ~ 76434615 (+)
LOC110496459 LOC106561246 other upstream 1220418 76167573 ~ 76181555 (+)
LOC110502077 LOC106561326 other downstream 653605 78047373 ~ 78066844 (+)
G187260 NA other downstream 743231 78137513 ~ 78177583 (+)
G187320 LOC106561323 other downstream 873007 78267289 ~ 78270045 (+)
LOC110496993 LOC106561317 other downstream 1090542 78467699 ~ 78519071 (+)

Expression


Co-expression Network