G187477


Basic Information

Item Value
gene id G187477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 77473469 ~ 77478822 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU212635
catctaAGACTTCAAGGATGTGTAATTTAAAGGTCTATTAATCTAATATTTATAAATATTTGAAGTCGCCTAATAAATGATCTTACCTATTTAGAACTACATCCATTCTCAGATGCAAAGTACTTCATGCTTTCTCATCCCAAAACAAGCCTTGTCTTTACTACACTGCCTTTTACATACAAACTGTTTTCCCCTTATAGTTTACAACTCCTTTCTTATCAAGTGGCTTTGAACAGGGTTTCATTTCACAGGAAATAAAGTTGATTTCAGAGAGCCAGACAGGAGTGTCTAATCGAGTGTCTGATCTTTTATACTGTTACTGATGCCTGAGTACAATGCCATGTTTGGTTCTAGAGTTGGagtacacacacaccgacacttACCCTGTGACACTCTCTATCAGATCAATAATGCTGGACGAGTGCCTGGTCCAGTGAGAAACGTTAGCTACCTGTTGATGCCCATATTCAACTGGATCCACCTCGACGTGGGGTACTACGTCCCTGATTCACTGAAAATAATTGACAAATTACAAAAATGAAGTAAGCTTTAAGCGACATCTTCTTGAGTGTGGACCCATCACACTACATCCTAAAATCGCTATCAATTCTGGATGTTGTAGTTTTTCTTCAAATCAGGAAATATAAATAGCCCATTTCGACCAGTGAGATGCCGAAAAACTCGCATTTGCGTATAGTGAGCAAAGTCTTGATTTGTATGACATATCATATGTTATTAACGTATTAATGGACAAATACAGTGAATGAGCAGAggtgacatttccctttaagaTGCTTCTCttggttgtgggggggggggggactatgagggaggatggggagatgaagaggtctgagagaacacaCCACCTTACACaacgcctgtgtgtgtttgtgcatggcAGGGAGGGAGCCAGCGTGCTctgcagccagccaggcagggtgACGAGGTATCAGTGATTTAGGAAGAGGACAAGAGCACCACAGTAGAATCCCCTGACTAACCATCCCTCAACCTGTCAAATAGAAATATACTGTACCTCCATCCATCAAACAGAGAGggcaggtggagaaagagagagtgagaatatacagagagagagagagagagagtgagaatatacagagggagagagaaagagagagtgagaatatacagagagagagagtgagaatatacagagagagagagagagagagaatagagagagagagagagagaatatacagagagagagagagtgagaatatacagagacagagagaaatagagtgagaATATACAGAGAAAAAGGGTGAgaatatacagagacagagagaaatagagtgagaatatacagagaaagagagtgagaatatacagagacagagagagagagagtgagaatatacagagagagagagagagtgagaatatacagaggaagagagagagagagtgagaatatacagagagagagagagtgagaatatacagaggtagagagagtgagactatacagagagacagagaaagagaatgagaatatacagagagagagtgagaatatagagaaagagaatgagaatatacagagagagagagtgagagaaagagtgagaatatacagagagagagagaaagagagtgagaatatacagagagagagagtgagagagagtgataatatacagagagacagagaaagagaatgagaatatacagagagagagagagaatatagagaaagagaatgagaatatacagaaagagagtgagaatatacagagagagagagtgagagaaggagtgagaatatacaaagagagagagagagagagaatatacagagggagagtgagagagagtgagaatatacagagaaagagagtgagaatatacagagagggagagtgagagaaagagtgagaatatacagagaaagagagtgagaatatACAGAGAACGTGAGAATATACAGAGAGCGTGAGAATatacagaaagagagtgagaatatacagagacagagagaaagagagtgagaatatactgagacagagagaaagaatgagaatatacagagagagagagaaagagagagagaatatacagagagagagaatatacagagaaagagaattttcggagaaagagagagataatatacagagggagaaatagagaaaatatacagagagagaaagagagagagataattttcagagacagaaagagagaaagagagagagagaatatacagagacagaaagagagagagagaatatacagtcagaaagagagagagagagaatatacagagacagaaagagagagaaagaatatacagagagagaaatagagagtatatacagagagagaaagagagagagataattttcagagacagaaagagagaaagagagagagagaatatacagagacagaaagagagagagagaatatacagtcagaaagagagagagagaatatacagagacagaaagagagagagataatatacagagatagaaagagagagaatatacagagacagaaagagagagagagaatatacagagacagaaagagagagagagaatatacagagacagaaagagagagagagaatatacagagagagagagagaatatacagagacagagagagagataatatacagacagaaagagagagagaatatacagagacagaaagagagagagagaatatacagagacagaaagagagagagaatatacagagacagaacgagagagagataatatacagagacagaaagagagagagataatatacagagacataaagagagtgagagagagagagagagaatatacagatacagaaagagagagagagaatatacagagacagaaagagagagagagaatatacagagacagaaagagagagagagaatatacagagacagaaagagagagagataatatacagagacagaaagagagagataatatacagagacagaaagagagagagataatatacaGAGACAGAGTATCACAGGGCAGGCTGACCCTCATCTGTCACTTTTTAGGACATGCTGTGGTTAACGTAGCCTCACGCatcttcatccctccatcaccacctccctctttctctctcgctctctctgtccctccttgtctctctctttctacccccttTACCCATACTGTACATTGATGTATAGCTGTATTATATTGATAGTGTGTTATGGGGTCAGGTCGTGGTGCTGGTATTGGAACGTCAGATCTGTGGATGTGTAAACCCTC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU212635 True 3276 lncRNA 0.40 4 77473469 77478822

Neighbor

gene id symbol gene type direction distance location
LOC100136242 odf3 coding downstream 296673 77171774 ~ 77176796 (-)
LOC110496628 rabl2b coding downstream 301808 77166074 ~ 77171661 (-)
arsa arsa coding downstream 783025 76676054 ~ 76690444 (-)
LOC110496598 LOC106561235 coding downstream 865411 76602051 ~ 76608058 (-)
LOC110496614 LOC106561236 coding downstream 883223 76584782 ~ 76590246 (-)
LOC110496686 NA coding upstream 236876 77715698 ~ 77745029 (-)
nudt7 nudt7 coding upstream 266904 77745726 ~ 77749429 (-)
LOC110496739 LOC106561348 coding upstream 273717 77752539 ~ 77759288 (-)
LOC110496728 LOC100194665 coding upstream 281905 77760727 ~ 77764403 (-)
LOC110496772 NA coding upstream 310411 77789233 ~ 77792954 (-)
G187490 NA non-coding downstream 1794 77470393 ~ 77471675 (-)
G187465 NA non-coding downstream 62693 77409612 ~ 77410776 (-)
wwox wwox non-coding downstream 81231 77386469 ~ 77682973 (-)
G186735 NA non-coding downstream 252506 77220708 ~ 77220963 (-)
G186719 NA non-coding downstream 267174 77206017 ~ 77206295 (-)
G187527 NA non-coding upstream 59002 77537824 ~ 77558873 (-)
G187531 NA non-coding upstream 65590 77544412 ~ 77544901 (-)
G187606 NA non-coding upstream 210444 77689266 ~ 77689549 (-)
G187614 NA non-coding upstream 218421 77697243 ~ 77697507 (-)
G187615 NA non-coding upstream 218690 77697512 ~ 77697717 (-)
si:dkey-234i14.6 LOC106561240 other downstream 1149579 76321757 ~ 76341834 (-)
G186197 LOC106561241 other downstream 1180077 76273524 ~ 76293392 (-)
adm2b adm2 other downstream 1373619 76093170 ~ 76099909 (-)
G187579 LOC106561332 other upstream 224077 77702899 ~ 77703489 (-)
G188257 NA other upstream 1137760 78616582 ~ 78617307 (-)
G189093 slc1a2 other upstream 1744408 79223230 ~ 79224998 (-)
G189256 NA other upstream 1887027 79365849 ~ 79366569 (-)
G189806 NA other upstream 2281217 79760039 ~ 79760627 (-)

Expression


Co-expression Network