G187017


Basic Information

Item Value
gene id G187017
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 77687559 ~ 77687838 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU212096
ctggcggctcaggacagacgggagactctggcggatcaggacagacgggagactctggcggatcaggacagacgggagactctggcagcgctggagaggaggaaggctctagcagcgctggacaggcgggaacacctgtaggcagaagacggagagacagcctcgTGCGGGGCCTGTCACctgagggctggtgtgtggaggtggcactggatagaccggaccgtgcaggcacaCTGgcgctcttgagcaccgagcctgcccaaccttacctggttgaatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212096 True 280 lncRNA 0.51 1 77687559 77687838

Neighbor

gene id symbol gene type direction distance location
LOC110496661 LOC106561266 coding upstream 381093 77295087 ~ 77387938 (+)
LOC110502025 LOC106573403 coding upstream 527715 76863449 ~ 77160850 (+)
mapk8ip2 arsa coding upstream 1013486 76538676 ~ 76714965 (+)
LOC100135907 LOC100135907 coding upstream 1149892 76531419 ~ 76537667 (+)
LOC110496527 sephs1 coding upstream 1289021 76389529 ~ 76398538 (+)
nfat5a LOC106561332 coding downstream 9388 77697226 ~ 77716788 (+)
LOC110496763 dynlrb2 coding downstream 89228 77777066 ~ 77780795 (+)
LOC110502056 LOC106561330 coding downstream 150930 77838768 ~ 77882208 (+)
LOC100135906 LOC100135906 coding downstream 275663 77963501 ~ 77969044 (+)
fbxl13 fbxl13 coding downstream 284006 77971844 ~ 78003571 (+)
G186996 NA non-coding upstream 27098 77656410 ~ 77660461 (+)
G186964 NA non-coding upstream 80056 77606934 ~ 77607503 (+)
G186953 NA non-coding upstream 93193 77593061 ~ 77594366 (+)
G186942 NA non-coding upstream 126612 77560037 ~ 77560947 (+)
G186938 NA non-coding upstream 130787 77556486 ~ 77556772 (+)
G187029 NA non-coding downstream 37627 77725465 ~ 77726151 (+)
G187030 NA non-coding downstream 39439 77727277 ~ 77728400 (+)
G187039 nudt7 non-coding downstream 57898 77745736 ~ 77746889 (+)
G187040 NA non-coding downstream 61185 77749023 ~ 77749430 (+)
G187051 NA non-coding downstream 76811 77764649 ~ 77764849 (+)
G185718 NA other upstream 855059 76830413 ~ 76832500 (+)
G185549 LOC106561235 other upstream 1080584 76534378 ~ 76606975 (+)
G185462 chkb other upstream 1252944 76433817 ~ 76434615 (+)
LOC110496459 LOC106561246 other upstream 1518264 76167573 ~ 76181555 (+)
LOC110502077 LOC106561326 other downstream 360049 78047373 ~ 78066844 (+)
G187260 NA other downstream 449675 78137513 ~ 78177583 (+)
G187320 LOC106561323 other downstream 579451 78267289 ~ 78270045 (+)
LOC110496993 LOC106561317 other downstream 796986 78467699 ~ 78519071 (+)

Expression


Co-expression Network