G187620



Basic Information


Item Value
gene id G187620
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 77708532 ~ 77709064 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU212797
GAATACGGTGGTAGTTGACTCACTGCAGAGGATGGGTGAGGAGGTGGTCTGCAGGGTAAGGACAGACCCATCAGCATGCGGGATGTTGACTCTAAAGGCCAGCCTGGCCCGGGTGCTCTTCTTCTTGGACCCGGCAACCCCAATACGAGCCTCCACGTCCGCGTTACGCAGCTTCAGGATCCCCACACAGTCAACCCTGTCAAGATTCAATGTTACAAAATGTTCAGAtggtgaaacaaacacacagtaacacgCTGATATTTCAACAACGCATCAATTAATGAGTCCCTTACGCCAGTGACATGGCGTTGCTGGGCTCCAGGGGGACCTCTATGACAGTGGTTCCCTCGATGTCCACTTCTTTGCAGGCTTTGGTATTTCGGCCTGTCACCCTGCAGGCCTGGTAGAACCCATGAGGCTTCACTCTGCCTGTGTCACTGGCCACAAACACCTGCAGCACCACCGGCTCACTGACACCCTCCAACTGGAGAGAGAAGTTGGTGAGTAGAGTTGAGAGTGCAACACAGCTTAAC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU212797 True 533 lncRNA 0.53 1 77708532 77709064

Neighbor


gene id symbol gene type direction distance location
wwox wwox coding downstream 25559 77386469 ~ 77682973 (-)
LOC100136242 odf3 coding downstream 531736 77171774 ~ 77176796 (-)
LOC110496628 rabl2b coding downstream 536871 77166074 ~ 77171661 (-)
arsa arsa coding downstream 1018088 76676054 ~ 76690444 (-)
LOC110496598 LOC106561235 coding downstream 1100474 76602051 ~ 76608058 (-)
LOC110496686 NA coding upstream 6634 77715698 ~ 77745029 (-)
nudt7 nudt7 coding upstream 36662 77745726 ~ 77749429 (-)
LOC110496739 LOC106561348 coding upstream 43475 77752539 ~ 77759288 (-)
LOC110496728 LOC100194665 coding upstream 51663 77760727 ~ 77764403 (-)
LOC110496772 NA coding upstream 80169 77789233 ~ 77792954 (-)
G187615 NA non-coding downstream 10815 77697512 ~ 77697717 (-)
G187614 NA non-coding downstream 11025 77697243 ~ 77697507 (-)
G187606 NA non-coding downstream 18983 77689266 ~ 77689549 (-)
G187527 NA non-coding downstream 149659 77537824 ~ 77558873 (-)
G187531 NA non-coding downstream 163631 77544412 ~ 77544901 (-)
G187635 NA non-coding upstream 68042 77777106 ~ 77780848 (-)
LOC110502034 NA non-coding upstream 89086 77798150 ~ 77800327 (-)
G187667 NA non-coding upstream 131443 77840507 ~ 77840913 (-)
G187687 NA non-coding upstream 171936 77881000 ~ 77881544 (-)
G187708 NA non-coding upstream 219986 77929050 ~ 77929258 (-)
G187579 LOC106561332 other downstream 5043 77702899 ~ 77703489 (-)
G187490 NA other downstream 237435 77470393 ~ 77471675 (-)
si:dkey-234i14.6 LOC106561240 other downstream 1384642 76321757 ~ 76341834 (-)
G186197 LOC106561241 other downstream 1415140 76273524 ~ 76293392 (-)
G188257 NA other upstream 907518 78616582 ~ 78617307 (-)
G189093 slc1a2 other upstream 1514166 79223230 ~ 79224998 (-)
G189256 NA other upstream 1656785 79365849 ~ 79366569 (-)
G189806 NA other upstream 2050975 79760039 ~ 79760627 (-)
G190857 NA other upstream 2843063 80552127 ~ 80552484 (-)

Expression



Co-expression Network