G187030


Basic Information

Item Value
gene id G187030
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 77727277 ~ 77728400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU212110
tattcaGTTAAGCATATTCAGTTATCCCCAGGTGAAATCTGTCAAATTATTGTTTAAAGTGAATTTGGTTTAGCTTGGAGTAAAGTATTTGGAAGTACAGACCCCAAACCTCCATTCTCACCTTAGTGTCTCCAGTTTACAGCGTGGATCCTCCAGTACAGCCGAGAGCAGCATCACTCCTGCGTCTCCTGGTTCATTGTCagtcaggtccagctctctcaggtgagaAGGGTTTGACTTCAGAGTTAAAGTCGGAGAAGCACAATCTTTGTTTGTGAAATCACAGTTTGACAGCCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212110 True 297 lncRNA 0.43 2 77727277 77728400

Neighbor

gene id symbol gene type direction distance location
nfat5a LOC106561332 coding upstream 10489 77697226 ~ 77716788 (+)
LOC110496661 LOC106561266 coding upstream 420811 77295087 ~ 77387938 (+)
LOC110502025 LOC106573403 coding upstream 567433 76863449 ~ 77160850 (+)
mapk8ip2 arsa coding upstream 1053204 76538676 ~ 76714965 (+)
LOC100135907 LOC100135907 coding upstream 1189610 76531419 ~ 76537667 (+)
LOC110496763 dynlrb2 coding downstream 48666 77777066 ~ 77780795 (+)
LOC110502056 LOC106561330 coding downstream 110368 77838768 ~ 77882208 (+)
LOC100135906 LOC100135906 coding downstream 235101 77963501 ~ 77969044 (+)
fbxl13 fbxl13 coding downstream 243444 77971844 ~ 78003571 (+)
LOC110502077 LOC106561326 coding downstream 318973 78047373 ~ 78066844 (+)
G187029 NA non-coding upstream 1126 77725465 ~ 77726151 (+)
G187017 NA non-coding upstream 39439 77687559 ~ 77687838 (+)
G186996 NA non-coding upstream 66816 77656410 ~ 77660461 (+)
G186964 NA non-coding upstream 119774 77606934 ~ 77607503 (+)
G186953 NA non-coding upstream 132911 77593061 ~ 77594366 (+)
G187039 nudt7 non-coding downstream 17336 77745736 ~ 77746889 (+)
G187040 NA non-coding downstream 20623 77749023 ~ 77749430 (+)
G187051 NA non-coding downstream 36249 77764649 ~ 77764849 (+)
G187052 NA non-coding downstream 38222 77766622 ~ 77766854 (+)
G187125 NA non-coding downstream 164424 77892824 ~ 77896154 (+)
G185718 NA other upstream 894777 76830413 ~ 76832500 (+)
G185549 LOC106561235 other upstream 1120302 76534378 ~ 76606975 (+)
G185462 chkb other upstream 1292662 76433817 ~ 76434615 (+)
LOC110496459 LOC106561246 other upstream 1557982 76167573 ~ 76181555 (+)
G187260 NA other downstream 409113 78137513 ~ 78177583 (+)
G187320 LOC106561323 other downstream 538889 78267289 ~ 78270045 (+)
LOC110496993 LOC106561317 other downstream 756424 78467699 ~ 78519071 (+)

Expression


Co-expression Network