G187125


Basic Information

Item Value
gene id G187125
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 77892824 ~ 77896154 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU212244
CTCTCCTGTTCTTAGTTTAATGGAGGCAAAATACAAATTACAGACAAGTAGCAACAATAGCATCAGAATGTAGGGATGAGGTGGGGGTTCAGTATGTTTTCTGTAACTTCAATCCTGAACCCTAATACGTTAAATATTAATTGTCAACATTATACATTTTACAGTTGTTGCATTTTGTGAAAAGAAAAACAAAGGGATTAACTGAATTGTGATGAAATTCTAATGTTTATGACTAGGATGTCCCCAATGAAAGAGATTGGTTTTCTTAAAGAAATACGGATGATACATCTCTTCTCATCTGACCCAAGACAAGTGGCCAGTACACTTCTGTAACAGGCTTATGTCAGTCTTATCACATGTTATGACAGTGTTTTGAAGCATTCTGACATCTGCTTAGTGCAAAGAGTCCTCGTCATTAAACCAGTAATATGCAACCAGCTCCTTCATTCTAGGACCTAGACCTTTCACTTACATCACTAGTAGCATATTGAATTGATGCACAATGTTAAGAAAATCATAAATAGATCTGTCATGTACAGAATGGACAAGATCCTCTCGTGTGGAACAGACAACCATGACCAATTTCTATATGAAACAATCAGAATGTGACCTATAGGATATTATATAACTAAGCACACAGATGAGGATAGGATATAGAATTGGGCACATGTAGTTTACTGTGGCAGGAATGGGACACCCTGTGTAGGTTGATGAGTAGCCTCTTAATGATGACAATTGTAAGAGAGAAAAATCCTGGAGCACTCCCAATGTGCTGCTCCTGAGTTAGTGATCACACAGGCTGAAAACCAAAAACACTGTCTGCTAGCCAGTCTGAGTATGTAGGTGCACTCATCTAGCCTGGATATCAGACAGTGATTTCTGCATTTCTGCTTTAGACCAAATTTACATAAGAACAACGACAAAGGAGTTGGCTACAGCAGAAACAGCCAGACACCCAGGCTAGATGAGTCCACCTGCACACTGCACTGAGAATACAGACAGAGAGGtcaatggcagccatattggataGGTCTGGATGAAACCCACTAACTGATCCTTGGGAAGGAGTGATCATGTGGTGGTCCTGATGGTAGCTTCCAACCCCCAAAATGTAGAAAGTCAACAAGTGAAATTGGATCTCAAAGTGCGATTCCTTATTGTGGTAATGACTCCAGAAACAGTGGGCCGTGCACTAGAACCAGAGAGCTTCTCTGAGAGCAAGGGGAGGGTAAAAAGCTGTGCCTGTCAAAACAGTGATTCACACACTTAATCAAATATAGAACAATTCTGAGAATTAAAAATCAAACTAGAGTGGGGGGTGGCCGGGTTACTGAGTATAAACATTCCATCCCTGTCTCCGTCATGACAATGACAGTCTGACACTCTTGTCTTCCCATGGTGCACTGCTCTCTGGTCTCAACCCATCAGTTCTATCAGGGTTGGGTCAAAGGTAACCTAAAGTAGCAGGCGCATGAGCTGAGTCCCCACATCCGTTTTTAAGGGGAAACGGAAGTTCTGTTGAAAATATTGTATCCCTGAAAAACTGAAAAATCCGCTTTCTGCCTACCCCGCGGATAGTGGGTCAACGGTCGATGAGAATACGACCCAGACCACAGCAGAGGGAATTTAGGATCCGGGGAATGCTGCACTCCTTTCTGGGTAAGAGGGGGTAatattgtggttgtggtggtggaggtaaAGGTGGAAGTGGTGGTAGAGGGGGACTATGACTGAGTTATAAAGAATATCTAGACAAGGGAGACATTTTAACACTTCACACCGCAGCTTCTCATACATATAATCCATAAAAATCCTTGTTTAGTAATAAAAAAATGGCCATGTTTATATGTATATAATAGTCTTTCTGCTCTTTAGGAAATTATAGTCCGTGTGTGTGAGGGGAGTGGGGGTTGTCTCCCCTTCACTACAACTCCATGTCCTGAGCCTCATCCTCGGAGAAGTCTGACATGGAACTCTCAGATGAGGAGTCGcctccctcctcctgctcctttaGAGCCTCCTCTGTCGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212244 True 2031 lncRNA 0.43 3 77892824 77896154

Neighbor

gene id symbol gene type direction distance location
LOC110502056 LOC106561330 coding upstream 10616 77838768 ~ 77882208 (+)
LOC110496763 dynlrb2 coding upstream 112029 77777066 ~ 77780795 (+)
nfat5a LOC106561332 coding upstream 176036 77697226 ~ 77716788 (+)
LOC110496661 LOC106561266 coding upstream 586358 77295087 ~ 77387938 (+)
LOC110502025 LOC106573403 coding upstream 732980 76863449 ~ 77160850 (+)
LOC100135906 LOC100135906 coding downstream 67347 77963501 ~ 77969044 (+)
fbxl13 fbxl13 coding downstream 75690 77971844 ~ 78003571 (+)
LOC110502077 LOC106561326 coding downstream 151219 78047373 ~ 78066844 (+)
LOC110496871 LOC106561322 coding downstream 337749 78233903 ~ 78266800 (+)
LOC110496927 LOC106561319 coding downstream 451926 78348080 ~ 78352645 (+)
G187052 NA non-coding upstream 125970 77766622 ~ 77766854 (+)
G187051 NA non-coding upstream 127975 77764649 ~ 77764849 (+)
G187040 NA non-coding upstream 143394 77749023 ~ 77749430 (+)
G187039 nudt7 non-coding upstream 145935 77745736 ~ 77746889 (+)
G187030 NA non-coding upstream 164424 77727277 ~ 77728400 (+)
G187138 NA non-coding downstream 21243 77917397 ~ 77917604 (+)
G187143 NA non-coding downstream 27498 77923652 ~ 77923853 (+)
G187151 NA non-coding downstream 33630 77929784 ~ 77930091 (+)
G187154 NA non-coding downstream 35209 77931363 ~ 77931647 (+)
G185718 NA other upstream 1060324 76830413 ~ 76832500 (+)
G185549 LOC106561235 other upstream 1285849 76534378 ~ 76606975 (+)
G185462 chkb other upstream 1458209 76433817 ~ 76434615 (+)
G187260 NA other downstream 241359 78137513 ~ 78177583 (+)
G187320 LOC106561323 other downstream 371135 78267289 ~ 78270045 (+)
LOC110496993 LOC106561317 other downstream 588670 78467699 ~ 78519071 (+)
LOC110497055 LOC106561315 other downstream 683218 78578149 ~ 78580190 (+)

Expression


Co-expression Network