G187154


Basic Information

Item Value
gene id G187154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 77931363 ~ 77931647 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU212273
aaagcaaatgacagattcctccaaagctcaggtgtcctgagtctgcacaactctgccaggaccataggatcaagagagacactcaagtgttttagtactatatctcttgacacaatgatgaaaataatcatggactctaaaccttcaagcggcatactggaccctattccaactgaactactgaaagagctgcttcctgtgcttggccctcctatgttgaacataataaatggctctctatccaccggatgtgtaccaaactcactaaaagtgtcagtaataaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212273 True 285 lncRNA 0.42 1 77931363 77931647

Neighbor

gene id symbol gene type direction distance location
LOC110502056 LOC106561330 coding upstream 49155 77838768 ~ 77882208 (+)
LOC110496763 dynlrb2 coding upstream 150568 77777066 ~ 77780795 (+)
nfat5a LOC106561332 coding upstream 214575 77697226 ~ 77716788 (+)
LOC110496661 LOC106561266 coding upstream 624897 77295087 ~ 77387938 (+)
LOC110502025 LOC106573403 coding upstream 771519 76863449 ~ 77160850 (+)
LOC100135906 LOC100135906 coding downstream 31854 77963501 ~ 77969044 (+)
fbxl13 fbxl13 coding downstream 40197 77971844 ~ 78003571 (+)
LOC110502077 LOC106561326 coding downstream 115726 78047373 ~ 78066844 (+)
LOC110496871 LOC106561322 coding downstream 302256 78233903 ~ 78266800 (+)
LOC110496927 LOC106561319 coding downstream 416433 78348080 ~ 78352645 (+)
G187151 NA non-coding upstream 1272 77929784 ~ 77930091 (+)
G187143 NA non-coding upstream 7510 77923652 ~ 77923853 (+)
G187138 NA non-coding upstream 13759 77917397 ~ 77917604 (+)
G187125 NA non-coding upstream 35209 77892824 ~ 77896154 (+)
G187052 NA non-coding upstream 164509 77766622 ~ 77766854 (+)
G187221 tmm60 non-coding downstream 139595 78071242 ~ 78073026 (+)
G187222 NA non-coding downstream 141708 78073355 ~ 78073712 (+)
G187268 LOC106561324 non-coding downstream 216679 78148326 ~ 78152909 (+)
G185718 NA other upstream 1098863 76830413 ~ 76832500 (+)
G185549 LOC106561235 other upstream 1324388 76534378 ~ 76606975 (+)
G185462 chkb other upstream 1496748 76433817 ~ 76434615 (+)
G187260 NA other downstream 205866 78137513 ~ 78177583 (+)
G187320 LOC106561323 other downstream 335642 78267289 ~ 78270045 (+)
LOC110496993 LOC106561317 other downstream 553177 78467699 ~ 78519071 (+)
LOC110497055 LOC106561315 other downstream 647725 78578149 ~ 78580190 (+)

Expression


Co-expression Network