G187260


Basic Information

Item Value
gene id G187260
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 78137513 ~ 78177583 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU212400
gtacatgtccaggcccatctgaagtttgttagagagcatttggatgatccagaagaagattgggagaatgtcatatggtcagatgaaaccaaaatataactttttggtaaaaactcaactcgtcgtgtttggaggacaaagaatgctgagttgcattcaaagaacaccatacctactgtgaaacatgggggtggaaacatcatgctttgggactgtttttctgcaaagggaccaggacgactgatccgtgtaaaggaaagaacgaatggggccatgtatcgtgagattttgagtgaaaacctccttccatcagcaagggcattgaagatgaaacgtggctgggtctttcagcatgacaatgatcccaaacacaccgcccgggcaacgaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtccgtgttgcccagcaacagccccaaaacatcactgctctagaggagatctgcatggaggaatgggccaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaacgttggACCTCTGTCATTGACaagaaagggtatataacaaagtattgagataaacttttgttattgaccaaatacttattttccaccataatttgcaaataaattcattaaaaatcctacaatgtgattttctggattttttccctcattttgtttgtcatagttgaagtgtacctatgatgacaattacaggcctctctcatccttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtatatctcactggtcgtccccaaagccaacacctccttcagcagcctttccttacagttctctgttgccaatgactggaacgaattgcaaaaatcgctgaagctggagacttatatttccctcactaactttaaacatcagctatctgagcagctaaccgatcgctgcagctgtacatagtctattggtaaatagcccacccattttcacctacctcatccccatactgtttttatttatttacttttctgctcttttgcacaccaatatctctacctgtacatgaccatctgatcatttatcactccagtgttaatctgcaaaattgtaattattcgcctacctcctcatgccttttgcacacattgtatatagactccccctttgttttctactgtgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctgttcacactgctatgccttatcttggccaggtcgcagttgcaaatgagaacttgttctcaactagcctacctggttaaataaaggtgaaataaataaaataaaaaaatatgccaAAGTGAAAGCAGCTAGTCTACATTTTGGCAGTTATGCCTAGTGTTGTTCTTACAATAAGAGAATTTAGTGAGCTAAGCATTTGAAAAGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212400 True 1513 TUCP 0.41 2 78137513 78177583

Neighbor

gene id symbol gene type direction distance location
LOC110502077 LOC106561326 coding upstream 70669 78047373 ~ 78066844 (+)
fbxl13 fbxl13 coding upstream 133942 77971844 ~ 78003571 (+)
LOC100135906 LOC100135906 coding upstream 168469 77963501 ~ 77969044 (+)
LOC110502056 LOC106561330 coding upstream 255305 77838768 ~ 77882208 (+)
LOC110496763 dynlrb2 coding upstream 356718 77777066 ~ 77780795 (+)
LOC110496871 LOC106561322 coding downstream 56320 78233903 ~ 78266800 (+)
LOC110496927 LOC106561319 coding downstream 170497 78348080 ~ 78352645 (+)
lrrc56 lrrc56 coding downstream 216525 78394108 ~ 78451563 (+)
LOC110496993 LOC106561317 coding downstream 290116 78467699 ~ 78519071 (+)
LOC110502110 LOC106561316 coding downstream 359444 78537027 ~ 78557268 (+)
G187222 NA non-coding upstream 63801 78073355 ~ 78073712 (+)
G187221 tmm60 non-coding upstream 64487 78071242 ~ 78073026 (+)
G187154 NA non-coding upstream 205866 77931363 ~ 77931647 (+)
G187333 NA non-coding downstream 92893 78270476 ~ 78270781 (+)
G187336 NA non-coding downstream 94750 78272333 ~ 78272606 (+)
G187338 NA non-coding downstream 96127 78273710 ~ 78273909 (+)
G187341 NA non-coding downstream 99080 78276663 ~ 78277026 (+)
G187343 NA non-coding downstream 102135 78279718 ~ 78280007 (+)
LOC110502025 LOC106573403 other upstream 976663 76863449 ~ 77160850 (+)
G185718 NA other upstream 1305013 76830413 ~ 76832500 (+)
G185549 LOC106561235 other upstream 1530538 76534378 ~ 76606975 (+)
G187320 LOC106561323 other downstream 89706 78267289 ~ 78270045 (+)
LOC110497055 LOC106561315 other downstream 401789 78578149 ~ 78580190 (+)
G191052 NA other downstream 2577558 80755141 ~ 80756647 (+)
G191057 accs other downstream 2587749 80765332 ~ 80766714 (+)

Expression


Co-expression Network