G187320 (LOC106561323)


Basic Information

Item Value
gene id G187320
gene name LOC106561323
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 78267289 ~ 78270045 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU212466
TTTTTATTAATAAATATCACTATTGTATGAATATAAACATTTTAAATTAGCCTTAACACTCCAATATCTTTCCTTGGAGGCTTTACAGGAGAAAATATGTAGGTTATTGATATGTTGCATACAGAAATACATATTCTTGATAACCACGGACAAGATAAAGGGCTTTATTCAATCTATCGCTGAAGCATTAAATTGCTAAAAGATTTAAAGGTTATTTCCGATTGCGCCGACAtttgcagcgtttaccgtgaatgcagtctccactaACGTGGGAACAGTGCCTTGAAATTTCAATCATGCTGTAACAACTTCCGCGATAAAGATTGAATTGAGCCCAAAGTCTATTTCCACTCTCCATTCTAAAGTCCCCAGGAGGAAAAGGCAGTTTACCCCTGTCATATCCACACTGTTCATGTTGACAAGCTGGAGTAAGGCATATTACAATGTTTGATACAGTGTAACTCCTCAGGAATGGGAACTACcaattaaaaaacaaaacacttcAATTTGAAGTACAATGTTCTGGACTACAGCCATTCATAAAAAATACCTTCATCAACATAAGCAAAATACTTCAGCTGAAGAAATCCCCTGCTCACACCTTCAATCCAAGGCCTTAACGCCTTTGTGCAGTGTTAGGGACTGTGTTTGAACAGAGATATTTTGCATGAGTCATGTCTATCATCAATACTGGTAAACAGTTAAAGGGAAAGTTTAAAAATGAGTTTGTTTTGCATGGAAAGATGctgtgtagtgtggttgtgtCCCAGACAGTACAGTTTCTTGAATGGATGAGGTAGCTAGTCAAAACCTTATAGATGTGATACAGGGACAGGATAGTTAACACTGAAATAAGAAAGCAATTTTACCAAAATAAGGGGTGGAATATTGCTGTGACAGTGAATGTTTAAAAAGTGTTTCCTTCTGCTAAAATTAAGTCACAGTATTGTAGCTATTAAAGATAATGTAATAGTCTACGAGCTGTTCCGCTCAGGTAATCTCTGTGGATGAAAAATATTACAGTGAAAACCCCACTTGGCAGTTCATCCCAGTTTGGCTTTCACCTAACTTTCTCACTCTCCGTCATCTGCCAGAGTCCCAGGTTTAAAACTTTAAGGCACGGGAGCTGCGTTATCCTCTCCAGGCCCCGCTTGGTGATTTTGGTACACCCATACAGGTCGATACCAGTGAGCTGCGTCAGGTGGTCAGCAATCAGCTCCAGCCCCTTGTCAGTGATGCGTACACACTGCCCAATGTTCAGCGTCTTGAGCTCGTGCATCTGGCGCACCATCCGGTTGATCCCGTCGTCACTGATGTGGCAGGAGCACAGGGACAGAGACTTGAGCTGGTACAGCCCCTGGGCGATGTAGGCCAGGCTCTGGTCACCTATCTTGTCGCAGAAGGAAACGTCCAGGCCAGAGAGCTGCAGAGACCCCATGGCCAGGTGCATGATGCCCATGTCACTGATGTTGTCACAGGACCGCAGGTTGATGCTTGACAGGTGATTCATGTTCGACAGATGGATCATACCTGCATCCGATATGCCTCCGCAGAAGCTGAGGTTGAGCACCTTGAGCTTGGCTAGTCCCTTGGAGACGTGTTTGAGGGACAGGTCTGTCAGTTTCTGGCAGTCCTGTAGTGTCATCTGCTCCAGGGAAAGGCAGCCTTCGGCAGCGCTTCGGGTCATCCCAGCCAGGTGACCAATGCCGACGTCTGACACATGCCTGCAGCTCCGCAGGTTAAGGCTCTTGAGTTTGTGCAAGCCCCAGGCAATGAGAAGAAGGCCTGTGTTGGTGATGTTACTGAGGCCTCCAAGTTCCAGCACCTCCAGGTTTTTGAGATACTGGGCAATCCTACCCAGGCTTGAGTCTGTGATTGGTTTGCAAAGGCTGAGGTTGAGGATTCGCAAGGACGGGATGTCTTGAATAAACGCATGTCCGAGGCCGTTGTCCGTGAGGTTAAAACAGCCACATAGGTTAAGGCTTTCGATGTTTGGCAGCCCCTGGATTACATAGCTTAGGCTTCGTCGCAAGCTTAGGATCTGGACCTTCCTAATGCCTCGGGTATGGAGGCTGGGGAACAGGGACGGGTTGGCCCTCCGCAGATGCAACTTCGCTTCCACCCCCCTCCACACAGACTTGTGATACGAAGCGTCCCTCCAGGCCGCACACACTTGGGCAACCCTACCTTTGTCCCTTACGTCCAAGTAACTGAAAATTATAGCTAAAATTTCCGGGAAGAGGCCAGATATGTGCGTTTCCATTTCAAACATGTTTGGAAAGGGAGAGGTTAGATAAAACTAACCAGGTATCCGCTTATTCGAGTAGGCTAgctaactgttagctagctaaattaggtAATGTTACTCAGGAAAATAACCTGTTCAAAGTCCAACCATCTCTTCATAATGCATATCCAACAAGAAGTGTGGAGGTTGTGTTATAATAGCTAGGTTATAATTATTCTAATCAAatgagatagctagctagctacgtccTACAAAAACTTgggatagctaacgttagttagcgtaCTTAAAGGCGGAAAACAGTGACGGTCAGGCGACTCTACCCAATTTCAAGTCAGATGACCGCTGTCGTTCTTCAAACGGATCCAGTCGGTCGTTCATTTTCAAAACAAAAAGTAGAAATGTATTGATGAAAACCGCAGTCTCTGTTTCTTCTGTGTCATCGATTAAAATACGTTTCTATTAGCATTTCGGTTCTGTTGTGGGATTCTTCCTGTGCTGCCTTTGTC

Function

NR:

description
F-box/LRR-repeat protein 14-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212466 True 2757 TUCP 0.45 1 78267289 78270045

Neighbor

gene id symbol gene type direction distance location
LOC110496871 LOC106561322 coding upstream 489 78233903 ~ 78266800 (+)
LOC110502077 LOC106561326 coding upstream 200445 78047373 ~ 78066844 (+)
fbxl13 fbxl13 coding upstream 263718 77971844 ~ 78003571 (+)
LOC100135906 LOC100135906 coding upstream 298245 77963501 ~ 77969044 (+)
LOC110502056 LOC106561330 coding upstream 385081 77838768 ~ 77882208 (+)
LOC110496927 LOC106561319 coding downstream 78035 78348080 ~ 78352645 (+)
lrrc56 lrrc56 coding downstream 124063 78394108 ~ 78451563 (+)
LOC110496993 LOC106561317 coding downstream 197654 78467699 ~ 78519071 (+)
LOC110502110 LOC106561316 coding downstream 266982 78537027 ~ 78557268 (+)
LOC110497055 LOC106561315 coding downstream 308104 78578149 ~ 78580190 (+)
G187268 LOC106561324 non-coding upstream 114380 78148326 ~ 78152909 (+)
G187222 NA non-coding upstream 193577 78073355 ~ 78073712 (+)
G187221 tmm60 non-coding upstream 194263 78071242 ~ 78073026 (+)
G187333 NA non-coding downstream 431 78270476 ~ 78270781 (+)
G187336 NA non-coding downstream 2288 78272333 ~ 78272606 (+)
G187338 NA non-coding downstream 3665 78273710 ~ 78273909 (+)
G187341 NA non-coding downstream 6618 78276663 ~ 78277026 (+)
G187343 NA non-coding downstream 9673 78279718 ~ 78280007 (+)
G187260 NA other upstream 89706 78137513 ~ 78177583 (+)
LOC110496763 dynlrb2 other upstream 486496 77777066 ~ 77780795 (+)
LOC110502025 LOC106573403 other upstream 1106439 76863449 ~ 77160850 (+)
G185718 NA other upstream 1434789 76830413 ~ 76832500 (+)
G191052 NA other downstream 2485096 80755141 ~ 80756647 (+)
G191057 accs other downstream 2495287 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 2795509 81058184 ~ 81080502 (+)

Expression


Co-expression Network