G187333


Basic Information

Item Value
gene id G187333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 78270476 ~ 78270781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU212483
TACTTCATCAATAAAGACAAAGGCTAGTTATTATGCAATATTGTACAGCGTCCCAAAGTTCACTTTTGGGATGTGGGATATTCGTTCTCACTTCTTGTTCGATTTTCACAACCTCTATTTGAATAACGTATATACATTCCTACAACAGCCAGAACATTTACTTCAAACCTCCTTCAAGTCACCTTCAGTGTCTGTCAGTAGGAAGTAGGGCCTGTGTAACCAAACACAAACTCCTGATAGCATGAATGCTCTTCAAGGGCCACTGGAAACCAAATACTCCCTTTATCCTAATGGTCAGTTCACACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212483 True 306 lncRNA 0.38 1 78270476 78270781

Neighbor

gene id symbol gene type direction distance location
LOC110496871 LOC106561322 coding upstream 3676 78233903 ~ 78266800 (+)
LOC110502077 LOC106561326 coding upstream 203632 78047373 ~ 78066844 (+)
fbxl13 fbxl13 coding upstream 266905 77971844 ~ 78003571 (+)
LOC100135906 LOC100135906 coding upstream 301432 77963501 ~ 77969044 (+)
LOC110502056 LOC106561330 coding upstream 388268 77838768 ~ 77882208 (+)
LOC110496927 LOC106561319 coding downstream 77299 78348080 ~ 78352645 (+)
lrrc56 lrrc56 coding downstream 123327 78394108 ~ 78451563 (+)
LOC110496993 LOC106561317 coding downstream 196918 78467699 ~ 78519071 (+)
LOC110502110 LOC106561316 coding downstream 266246 78537027 ~ 78557268 (+)
LOC110497055 LOC106561315 coding downstream 307368 78578149 ~ 78580190 (+)
G187268 LOC106561324 non-coding upstream 117567 78148326 ~ 78152909 (+)
G187222 NA non-coding upstream 196764 78073355 ~ 78073712 (+)
G187221 tmm60 non-coding upstream 197450 78071242 ~ 78073026 (+)
G187336 NA non-coding downstream 1552 78272333 ~ 78272606 (+)
G187338 NA non-coding downstream 2929 78273710 ~ 78273909 (+)
G187341 NA non-coding downstream 5882 78276663 ~ 78277026 (+)
G187343 NA non-coding downstream 8937 78279718 ~ 78280007 (+)
G187344 NA non-coding downstream 10255 78281036 ~ 78281368 (+)
G187320 LOC106561323 other upstream 431 78267289 ~ 78270045 (+)
G187260 NA other upstream 92893 78137513 ~ 78177583 (+)
LOC110496763 dynlrb2 other upstream 489683 77777066 ~ 77780795 (+)
LOC110502025 LOC106573403 other upstream 1109626 76863449 ~ 77160850 (+)
G191052 NA other downstream 2484360 80755141 ~ 80756647 (+)
G191057 accs other downstream 2494551 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 2794773 81058184 ~ 81080502 (+)

Expression


Co-expression Network