G187338


Basic Information

Item Value
gene id G187338
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 78273710 ~ 78273909 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU212488
gatacaactgtgggaagcattggagtcaacatggccagcatccctgtggaacgcttttgacaccttgtatagtccatgtcctgaagaattgagactgttctgagggcaaaaggtgggtgcagctcaatattaggaaggtatacctaatgttttgtatactcagcgTATATTCATGAAGCCAATATTATTTCTGTGTCTCA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212488 True 200 lncRNA 0.43 1 78273710 78273909

Neighbor

gene id symbol gene type direction distance location
LOC110496871 LOC106561322 coding upstream 6910 78233903 ~ 78266800 (+)
LOC110502077 LOC106561326 coding upstream 206866 78047373 ~ 78066844 (+)
fbxl13 fbxl13 coding upstream 270139 77971844 ~ 78003571 (+)
LOC100135906 LOC100135906 coding upstream 304666 77963501 ~ 77969044 (+)
LOC110502056 LOC106561330 coding upstream 391502 77838768 ~ 77882208 (+)
LOC110496927 LOC106561319 coding downstream 74171 78348080 ~ 78352645 (+)
lrrc56 lrrc56 coding downstream 120199 78394108 ~ 78451563 (+)
LOC110496993 LOC106561317 coding downstream 193790 78467699 ~ 78519071 (+)
LOC110502110 LOC106561316 coding downstream 263118 78537027 ~ 78557268 (+)
LOC110497055 LOC106561315 coding downstream 304240 78578149 ~ 78580190 (+)
G187336 NA non-coding upstream 1104 78272333 ~ 78272606 (+)
G187333 NA non-coding upstream 2929 78270476 ~ 78270781 (+)
G187268 LOC106561324 non-coding upstream 120801 78148326 ~ 78152909 (+)
G187222 NA non-coding upstream 199998 78073355 ~ 78073712 (+)
G187221 tmm60 non-coding upstream 200684 78071242 ~ 78073026 (+)
G187341 NA non-coding downstream 2754 78276663 ~ 78277026 (+)
G187343 NA non-coding downstream 5809 78279718 ~ 78280007 (+)
G187344 NA non-coding downstream 7127 78281036 ~ 78281368 (+)
G187345 NA non-coding downstream 7497 78281406 ~ 78282099 (+)
G187346 NA non-coding downstream 8355 78282264 ~ 78282633 (+)
G187320 LOC106561323 other upstream 3665 78267289 ~ 78270045 (+)
G187260 NA other upstream 96127 78137513 ~ 78177583 (+)
LOC110496763 dynlrb2 other upstream 492917 77777066 ~ 77780795 (+)
LOC110502025 LOC106573403 other upstream 1112860 76863449 ~ 77160850 (+)
G191052 NA other downstream 2481232 80755141 ~ 80756647 (+)
G191057 accs other downstream 2491423 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 2791645 81058184 ~ 81080502 (+)

Expression


Co-expression Network