Gene
RNA
| Item | Value |
|---|---|
| gene id | G188108 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 78371859 ~ 78372265 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU213349 | True | 353 | lncRNA | 0.50 | 2 | 78371859 | 78372265 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496911 | LOC106561320 | coding | downstream | 30283 | 78301573 ~ 78344271 (-) |
| LOC110496900 | LOC106561323 | coding | downstream | 101639 | 78267071 ~ 78270220 (-) |
| LOC110496855 | LOC106561324 | coding | downstream | 153243 | 78151133 ~ 78218616 (-) |
| LOC118942057 | NA | coding | downstream | 229391 | 78129577 ~ 78142468 (-) |
| LOC110496836 | LOC100286559 | coding | downstream | 268583 | 78079493 ~ 78103276 (-) |
| LOC110497044 | irf7b | coding | upstream | 188713 | 78560978 ~ 78565956 (-) |
| LOC110497066 | LOC106561314 | coding | upstream | 338633 | 78710898 ~ 78853465 (-) |
| LOC110497088 | trim44 | coding | upstream | 554186 | 78926451 ~ 78998262 (-) |
| LOC110497116 | fjx1 | coding | upstream | 675167 | 79047432 ~ 79049962 (-) |
| LOC110502122 | LOC106561308 | coding | upstream | 871347 | 79243612 ~ 79276976 (-) |
| G188067 | LOC106561319 | non-coding | downstream | 17949 | 78349980 ~ 78353910 (-) |
| G187880 | NA | non-coding | downstream | 75623 | 78295820 ~ 78296236 (-) |
| G187809 | NA | non-coding | downstream | 174586 | 78138268 ~ 78197273 (-) |
| G187767 | NA | non-coding | downstream | 295473 | 78076139 ~ 78076386 (-) |
| G188210 | NA | non-coding | upstream | 162255 | 78534520 ~ 78534808 (-) |
| G188238 | LOC106561315 | non-coding | upstream | 206152 | 78578417 ~ 78580141 (-) |
| G188240 | NA | non-coding | upstream | 212155 | 78584420 ~ 78585120 (-) |
| G188283 | LOC105030512 | non-coding | upstream | 262330 | 78634595 ~ 78634833 (-) |
| G188295 | NA | non-coding | upstream | 270986 | 78643251 ~ 78643460 (-) |
| G187579 | LOC106561332 | other | downstream | 668370 | 77702899 ~ 77703489 (-) |
| G187490 | NA | other | downstream | 900762 | 77470393 ~ 77471675 (-) |
| LOC110496628 | rabl2b | other | downstream | 1200220 | 77166074 ~ 77171661 (-) |
| si:dkey-234i14.6 | LOC106561240 | other | downstream | 2047969 | 76321757 ~ 76341834 (-) |
| G186197 | LOC106561241 | other | downstream | 2078467 | 76273524 ~ 76293392 (-) |
| G188257 | NA | other | upstream | 244317 | 78616582 ~ 78617307 (-) |
| G189093 | slc1a2 | other | upstream | 850965 | 79223230 ~ 79224998 (-) |
| G189256 | NA | other | upstream | 993584 | 79365849 ~ 79366569 (-) |
| G189806 | NA | other | upstream | 1387774 | 79760039 ~ 79760627 (-) |
| G190857 | NA | other | upstream | 2179862 | 80552127 ~ 80552484 (-) |
